Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01296 ATGAGCTTTCTAAGCATGGTTGAGGCAAAATTGCCTCCTGGTTTCAGGTTCCATCCAAGAGATGAAGAACTAATCTGTGATTACTTGATGAAGAAGGTGATAGACAATAATGGCAAGGGGAGTAGTTCTTACGAGTCTCCTATGATGATTGAGGTCGACTTGAACAAGTGCGAACCGTGGGATCTTCCAGATATGGCATGTGTGGGAGGCAAGGAATGGTACTTCTTCAGTCAACGCGATAGGAAATACGCGACGGGACTACGAACAAACCGCGCGACAGTGTCTGGATACTGGAAGGCTACCGGAAAAGATAGGCCGGTTGTTCGCAAAGGAACCCTGGTAGGGATGAGGAAAACCCTAGTTTTCTACCAAGGAAGAGCACCAAAAGGAAGAAAAACTGACTGGGTTATGCATGAATATCGGCACGAAGGACCCTCGAATCTACCAAAAACTTCTTTCAAGAAAGAGGAAGATTGGGTCCTGTGTAGAGTATTCTACAAACGTAGAGGAGTATCTGCAAAACCTAGCGTGGAAAACTGCTACGATGACACAAGCTCTTCATCTCTTCCGCCATTAATGGATTCCTACATCACTTTTAACCAAACTCGACCAAATTTTCAGGAGTTTGAGCAAGTGCCCTGCTTCTCCAGTTCTTCTCAGAACCAAATAAACCCAGCAAACTTCTCACACTTGCCCCAGATGGAACCAAACATAGACACCACCAAGAACATGGGCAACATGGAGGGATTACCTGATTTTACTTCTTATTTTAACCCTTTTCCTTGTGAGAAAAAAGTCATAAAAGCAGTTTTGGATCATTTTACTAGTTTAGAGAGCAATTTAAAGGTGGTTTCACCTAATTTAGGTGAAGGGAGTGCAGAAAGCTACTTATCTGAAGTGGGTTTGCCGACTATGTGGAATCATTATTGA 930 0.4344 MSFLSMVEAKLPPGFRFHPRDEELICDYLMKKVIDNNGKGSSSYESPMMIEVDLNKCEPWDLPDMACVGGKEWYFFSQRDRKYATGLRTNRATVSGYWKATGKDRPVVRKGTLVGMRKTLVFYQGRAPKGRKTDWVMHEYRHEGPSNLPKTSFKKEEDWVLCRVFYKRRGVSAKPSVENCYDDTSSSSLPPLMDSYITFNQTRPNFQEFEQVPCFSSSSQNQINPANFSHLPQMEPNIDTTKNMGNMEGLPDFTSYFNPFPCEKKVIKAVLDHFTSLESNLKVVSPNLGEGSAESYLSEVGLPTMWNHY* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01296 309 Gene3D NAC domain 20 171 IPR036093 GO:0003677|GO:0006355
Eupl02g01296 309 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 219 - -
Eupl02g01296 309 SUPERFAMILY NAC domain 3 167 IPR036093 GO:0003677|GO:0006355
Eupl02g01296 309 ProSiteProfiles NAC domain profile. 11 167 IPR003441 GO:0003677|GO:0006355
Eupl02g01296 309 Pfam No apical meristem (NAM) protein 12 141 IPR003441 GO:0003677|GO:0006355
Eupl02g01296 309 FunFam NAC domain-containing protein 100-like 20 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01296 Eupl-Chr2 29008653 29011998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01296 2 307 NAC Transcription Factor Family AT1G56010 53.067 2.91e-114 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl02g01296 NAM 1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01296 - - nnu:104598350 481.485