Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01286 ATGGATGTCCAAGATGATGCAGCTTATCTCTCAGGGTTAGGCTTGACCCGCTTGATATGCCTTCCAATGGCTTTTAGAGCTGCAATTGAGCTAAATGTGTTCAAAATCATCGGACAATCGGGACCACGAGCTGAACTTTCTCCGTCGGAGATGGTCGCAAAGATGACGACAAACAATCCAAATGCAGCGAGTGCCTTGGAGCGAATACTTCGAATGCTAGGTGCAAGCTCCATCCTCTCCGTTTCTCTGAGGCCATGCACCGATGGTACGAAGCCCGAGAGGGTATACGGCTTAACGAGCAAGTCGCGTTGTTTAGTGCCTACAGAGGATGAAGTGTCGGTGGTGCCGATGATGCTAATGGCCTTCGATAAGGTGGTTGTGGAGAGCTTTTATCGGCTCAAAGACGCTGTGCTCGAAGAAGGGTGTGTGCCATTTGATAAGGCTCATGGTGTTAGTTTCTTCGAGTATTCGGCTAAGGAACCTAGTGTGAACAAATTGTTCAATGAAGCCATGGGGACTAGCTCGACCCTTGCTTTCGACGAGGTGTTTAAGGTGTATGGAGGCTTCCATGATATGAAAGAGCTGATGGATGTTGGTGGTGGCATTGGAACTTCGCTTAGTAACATAGTAAATAAGTACCCACACATCCGTGCCATTAATTTTGATTTGCCTCACGTTATTGCTGATGCTCCTAACTATCCAGGTGTGGAGCATGTTGCAGGAGATATGTTTGAGGAGGTGCCAGAGGCTCAAAACATTTTGCTAAAGTGGGTGCTTCACGATTGGGATGACGATCGGTGCATGAAGTTACTAAAGAATTGTTGGACATCATTGCTTGATGGTGGGAAAGTGATAGTCATCGAGTTTGTTATCCCTCAAATAATAGAAAACAATGATGAGTGCTTCAATGCATTAGCTCCTGATCTTCTTATGATGGCATTGAATCATGGTGGCAAGGAGCGGACAACTGTCGAATATGGTGATATAGCAAGAGCAAAAAACCTTCGTACGTGCGGTCTGATCGATCGGTCAAACAAAATACGGTCTTCGATCGAAATAGAGGCAGAAAAAGTTTTTCTGAATTTTGAACTCCGCTCAATACCTATCAAGCTGATCGATCGATCAAGGAAAGTTTTGTCTAGAAATCCTTGTTTCGCATATCGATTTGCTACACATCTAATCAATGACATTAGATATGATTTTTAA 1206 0.4453 MDVQDDAAYLSGLGLTRLICLPMAFRAAIELNVFKIIGQSGPRAELSPSEMVAKMTTNNPNAASALERILRMLGASSILSVSLRPCTDGTKPERVYGLTSKSRCLVPTEDEVSVVPMMLMAFDKVVVESFYRLKDAVLEEGCVPFDKAHGVSFFEYSAKEPSVNKLFNEAMGTSSTLAFDEVFKVYGGFHDMKELMDVGGGIGTSLSNIVNKYPHIRAINFDLPHVIADAPNYPGVEHVAGDMFEEVPEAQNILLKWVLHDWDDDRCMKLLKNCWTSLLDGGKVIVIEFVIPQIIENNDECFNALAPDLLMMALNHGGKERTTVEYGDIARAKNLRTCGLIDRSNKIRSSIEIEAEKVFLNFELRSIPIKLIDRSRKVLSRNPCFAYRFATHLINDIRYDF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01286 401 Pfam O-methyltransferase domain 130 331 IPR001077 GO:0008171
Eupl02g01286 401 Pfam Dimerisation domain 23 73 IPR012967 GO:0046983
Eupl02g01286 401 PANTHER O-METHYLTRANSFERASE 17 332 IPR016461 GO:0008168
Eupl02g01286 401 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Eupl02g01286 401 Gene3D - 1 105 IPR036388 -
Eupl02g01286 401 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Eupl02g01286 401 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 13 355 IPR016461 GO:0008168
Eupl02g01286 401 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Eupl02g01286 401 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 337 IPR029063 -
Eupl02g01286 401 Gene3D Vaccinia Virus protein VP39 107 353 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01286 Eupl-Chr2 28586687 28595200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01286 1 336 Monolignol Biosynthesis Gene Families AT5G54160 44.345 1.76e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01286 K13397 K13066 ag:BAA06192 474.552