Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01281 ATGGATTCAGCAAGGAGCTGGTTTCATAAATTTCAACCTAGAAAAGATAAATTAAAATCTGGATTGACGAATAAAAAGGAAACAGATAGTGGGAAGGACACACAGAAGCCTCCGATTGATGAGGCCCCATCCAATGTCACAAAACAGAAGGTTGCTGCTGCGAAGCAGTACATTGAGAATCATTACAAGGCTCAGATGAAGTGCTTGCAAGATAGAAAGGAGAGACGTTGGATTTTGGAGAGGAAGCTTGCTGATGCTGAAGTTTCTGAGGAAGAGCAGTACAATCTCCTGAAATACTTGGAGAAAAAGGAGACAGAATATATGCGCCTTCAAAGACACAAAATGGGTGTTGATGATTTTGAACTCCTGACCATGATAGGACGGGGTGCATTTGGGGAGGTGAGACTTTGTAGAGAAAAGACCACCGGTCATGTGTATGCAATGAAAAAACTAAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTGGAGCATGTTAAAGCTGAAAGGAATCTCCTTGCTGAGGTGGACAGTGCTTGCATTGTCAAGCTTTACTGCTCCTTTCAAGATGAAGAGTTTTTGTATCTCATTATGGAATATCTTCCTGGTGGTGATATGATGACATTACTAATGCGCAAAGATACCTTGACCGAGGATGAGGCCAAGTTTTATGTTGGACAGACAGTTCTTGCCATCGAATCTATTCACAAGCATAATTACATCCACAGGGATATCAAGCCCGACAATTTATTGCTTGATCGTTATGGTCATATGAAGCTTTCGGATTTTGGATTGTGTAAACCCTTGGACTGTAGTAGTTTTCCAAATCTAAGCGAGAATGACTGTGGAGTGGGAAGAAATTTCAAACCTTCATTGGAGCGTGATAAGCCTTCAAATATGACTCCTGCCCCAAGGCGTACACAGCAAGAACAATTATTACATTGGCAAAAGAACAGGCGAATGTTGGCTTTCTCCACGGTTGGGACTCCAGATTACATTGCTCCGGAAGTTCTGTTGAAGAAAGGATATGGAATGGAGTGTGATTGGTGGTCCCTTGGATCAATTATGTATGAGATGCTTGTGGGTTATCCACCATTTTATTCTGAAGAACCGATGTCAACCTGCAGAAAGATTGTAAACTGGAGAACTCACTTGAAATTCCCTGAAGAAGCAAAGCTGTCTTCGGAGGCTAAAGATCTGATCAGCAAACTACTGTGCAATGTGGAGCAGAGGCTTGGGACCAAAGGAGCTCATGAAATAAAAGCACATCCATGGTTTAAAGGCATCCAATGGGACAGACTATACCAGATGGAAGCTGCTTTTATACCTGAGGTTAATGATGAGTTAGATACTCAGAACTTTGAGAAGTTTGAGGAGTCAGGGCCTCCAATGCAAACTTCATCAAAATCAGGTCCATGGAGAAAGATGCTTCCGTCGAAGGATGCGAACTTTGTGGGTTATACATACAAAAATTTTGAAATTGTCAATGACCATCACGTGCCTGGCATTGCAGAGTTGAAGAAAAAGACTAATAAGCCAAAGAGACCATCGATTAAGTCATTGTTCGATCCTGCTGGTGCTACCGATCAGCCTGTCCAGGGAAGCTTTCTCAACCTGTTGCCTACCCAAATGGAAGTATCTGAAAGCCCTGAATCGCCACCTCACCCCAGTAGACCACCAATGTATTAG 1686 0.427 MDSARSWFHKFQPRKDKLKSGLTNKKETDSGKDTQKPPIDEAPSNVTKQKVAAAKQYIENHYKAQMKCLQDRKERRWILERKLADAEVSEEEQYNLLKYLEKKETEYMRLQRHKMGVDDFELLTMIGRGAFGEVRLCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSACIVKLYCSFQDEEFLYLIMEYLPGGDMMTLLMRKDTLTEDEAKFYVGQTVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSSFPNLSENDCGVGRNFKPSLERDKPSNMTPAPRRTQQEQLLHWQKNRRMLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGSIMYEMLVGYPPFYSEEPMSTCRKIVNWRTHLKFPEEAKLSSEAKDLISKLLCNVEQRLGTKGAHEIKAHPWFKGIQWDRLYQMEAAFIPEVNDELDTQNFEKFEESGPPMQTSSKSGPWRKMLPSKDANFVGYTYKNFEIVNDHHVPGIAELKKKTNKPKRPSIKSLFDPAGATDQPVQGSFLNLLPTQMEVSESPESPPHPSRPPMY* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01281 561 Gene3D Transferase(Phosphotransferase) domain 1 324 443 - -
Eupl02g01281 561 Gene3D Transferase(Phosphotransferase) domain 1 204 269 - -
Eupl02g01281 561 SMART serkin_6 120 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01281 561 SMART pkinase_C_6 426 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl02g01281 561 FunFam Non-specific serine/threonine protein kinase 324 443 - -
Eupl02g01281 561 MobiDBLite consensus disorder prediction 506 561 - -
Eupl02g01281 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 426 498 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl02g01281 561 SUPERFAMILY Protein kinase-like (PK-like) 101 478 IPR011009 -
Eupl02g01281 561 Gene3D Phosphorylase Kinase; domain 1 118 203 - -
Eupl02g01281 561 Gene3D Phosphorylase Kinase; domain 1 444 454 - -
Eupl02g01281 561 ProSiteProfiles Protein kinase domain profile. 120 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01281 561 MobiDBLite consensus disorder prediction 530 549 - -
Eupl02g01281 561 MobiDBLite consensus disorder prediction 1 36 - -
Eupl02g01281 561 CDD STKc_NDR_like 118 489 - -
Eupl02g01281 561 CDD MobB_NDR_LATS-like 54 115 - -
Eupl02g01281 561 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Eupl02g01281 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 34 469 - -
Eupl02g01281 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Eupl02g01281 561 MobiDBLite consensus disorder prediction 1 47 - -
Eupl02g01281 561 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Eupl02g01281 561 MobiDBLite consensus disorder prediction 457 472 - -
Eupl02g01281 561 MobiDBLite consensus disorder prediction 455 474 - -
Eupl02g01281 561 Pfam Protein kinase C terminal domain 444 488 IPR017892 GO:0004674|GO:0005524|GO:0006468
Eupl02g01281 561 MobiDBLite consensus disorder prediction 287 307 - -
Eupl02g01281 561 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Eupl02g01281 561 Pfam Protein kinase domain 121 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01281 561 Pfam Protein kinase domain 323 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01281 Eupl-Chr2 28452564 28508174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01281 40 544 AGC Kinase Gene Family AT4G14350 79.487 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Eupl02g01281 Pkinase 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01281 K08790 - msin:131248300 1006.51