Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01279 ATGTCGAAATCACATGAAGAGAAGTCACAAGAGGCATTTGGATGGGCAGCAAAAGAGTCTTCAGGAATCCTATCCCCCTTTTGCTTCACAAGAAGGGCTAACGGTGACGATGATATCACGTTGAAGATACTTTACTGCGGAGTTTGCCATTCAGACCTTCACATCATCAAGAATGATTTTGGATTTTCGGTGTACCCAGTTGTTCCAGGGCACGAGATCACGGGAGTGGTCACTCAGGTGGGCTGCAAAGTAGAAAAATTCAAAGTGGGAGATAAAGTCGGCGTGGGGTGCTTTATAGGCTCTTGCCAAACATGCGATAGCTGCGAGCGAGGTTTGGAGAATTACTGCCCAAAATCGATTTACACATACACCATCTTCGACGACGGAAGTACAAAAAACTATGGTGGATATTCTGATATTCTCACCGTAAATGAACGCTTCGTCGTTCGCTTCCCCGAAAACCTCCCATTAGACCGTGGTGCACCACTATTGTGTGCTGGGATTACGGTGTACAGCCCAATGAAATATTTTGGACTCAGTGAGCCAGGGAAGCATTTGGGGGTGGTTGGGCTTGGTGGACTCGGGCATTTGGCCGTGAAATTCGCGAAAGCTTTTGGTATGAAGGTTACTGTTATCAGCACATCCCCAAGCAAGGAGAAAGAAGCCGTTGTACGACTCGGTGCCGACTCATTTCTGGTTAGCCATAATCTAGAGCAAATGCAGGCTGCAGGAAGCACAATGGATGGCATACTTGATACGGTCTCTCCCCCTCACCCTCTTGTACCGTTGATCGATCTTTTGAAGCCTCAGGGGAAGCTGATTATGTTGGGGGCACCACGCGATAAACCAATTGAGCTGCCATTCTCTCGTTTACGTATGGGGAGGAAGCTTATTGCAGGAAGTATGGCAGGAGGGTTGAAGGAGACACAAGAGATGATAGATTTAGCAGGGGAACATAACATACACGCAGATGTTGAAGTTATTTCGATGAATTATGTGAACGTGGCAATGGAGCGACTCGCGAGAGGTGACATCAGATACCGTTTTGTTATCGACATAGCGAACACCTTATATGCTTAG 1080 0.4713 MSKSHEEKSQEAFGWAAKESSGILSPFCFTRRANGDDDITLKILYCGVCHSDLHIIKNDFGFSVYPVVPGHEITGVVTQVGCKVEKFKVGDKVGVGCFIGSCQTCDSCERGLENYCPKSIYTYTIFDDGSTKNYGGYSDILTVNERFVVRFPENLPLDRGAPLLCAGITVYSPMKYFGLSEPGKHLGVVGLGGLGHLAVKFAKAFGMKVTVISTSPSKEKEAVVRLGADSFLVSHNLEQMQAAGSTMDGILDTVSPPHPLVPLIDLLKPQGKLIMLGAPRDKPIELPFSRLRMGRKLIAGSMAGGLKETQEMIDLAGEHNIHADVEVISMNYVNVAMERLARGDIRYRFVIDIANTLYA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01279 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Eupl02g01279 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Eupl02g01279 359 SUPERFAMILY GroES-like 23 184 IPR011032 -
Eupl02g01279 359 Gene3D - 166 323 - -
Eupl02g01279 359 CDD CAD1 13 352 IPR047109 GO:0016616
Eupl02g01279 359 Pfam Zinc-binding dehydrogenase 193 315 IPR013149 -
Eupl02g01279 359 Pfam Alcohol dehydrogenase GroES-like domain 37 149 IPR013154 -
Eupl02g01279 359 FunFam probable cinnamyl alcohol dehydrogenase 15 174 - -
Eupl02g01279 359 Gene3D - 15 353 - -
Eupl02g01279 359 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Eupl02g01279 359 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0016616
Eupl02g01279 359 SMART PKS_ER_names_mod 22 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01279 Eupl-Chr2 28381482 28387102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01279 9 357 Monolignol Biosynthesis Gene Families AT4G37990 65.043 4.94e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01279 K23232 - rvl:131312937 546.199