Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01277 ATGAAGCTTTTGCTAGGGCTAAAGATGAAGCTTCTTCGCCTTTTGACGCTATACTTAGTTTTCATTTCCACCACTGCCCAGCTTCCTTCACAGGACATTTTGACTCTTCTTGAATTCAAGAAAGGAATTGAGCACGACCCAACAGGTTACATCCTCGATTCTTGGAATGAGGAGTCCATTGACTTCAATGGCTGCCCTTCCTCCTGGAATGGAATCGTTTGTAATGGTGGCAATGTAGCTGCTGTTGTCCTTGATCACCACGGTCTCTCTGCCCAGGCAGACTTGAGCGTCTTTGCGAACCTCACCATGCTTGTGAAACTCTCCATGTCGAACAATTCCATCTCCGGAAGAATCCCCATCAACATAGCTGACTTCAAAATCCTAGAATTTCTTGATGTTTCAGATAATCTGTTTTCGTCGACTTTACCACCGGAGATTGGCAAGTTACAGAACTTACAAAACCTCTCGTTAGCAGGAAACAACTTCTCTGGCCCAATTCCAGAGTCAATCGGCGGGCTCGCCTCGCTTCAGTCCCTGGATTTCAGCCGGAACTCGTTTTCTGGGTCGTTGCCTTCATCGTTGACAAAACTACAAAACTTGGTGGTTCTAAATGTCTCAAGTAATGGGTTTACAAAGAGGATCCCAACTGGGTTCGAGCTGATGCCAAATCTTGAAGTGCTCGATTTGCATTGGAATAAATTTGAAGGTCACATTGACGCGGAGTTTTTGCTTCTTTCAACTGCTGTTCATGTTGATCTTAGTGGAAATTTGCTATCAAGTTCTAGTTCTCAGGAGCAGAAATTCCTGCCCGGTATTTCAGAGACTATTAAGTATTTGAACCTGAGCAACAACCGGCTTACAGGGTCACTCAATGGAGGTGATCTTTCTATATTTGAGAACTTGAAGGTGTTGGATCTCAGCTACAATCAACTGTCGGGAGAGTTACCTGAATTTAATTTTGTGTATGACCTCGAGGTTCTAAGGCTCAGTAACAATAGATTTTCTGGGTTTGTACCTGTTGGGCTTCTGAAAGATGGTTCTTTGGTCCTAAACGAACTGGATTTAAGTTCCAACAATCTTTCAGGGCCCATTAGTATGATCACATCAACATATTTACGCGTGCTCAATCTCTCCTCAAATGAAATTTCTGGCGAACTTCCATTGCTGATTGGAAGCTGCATTGTACTAGATCTGTCAAAAAATCAATTTACAGGAAATTTATCCCATATGTTGAAATGGGGGAACTCCATCGAGTTCCTTGATCTAAGCCAGAACCAGTTGATGGGGTCTATCCCTGACGTAACATCAGAGTTTTTACGGCTAAATTACCTCAACCTATCTCAGAATTCTCTGAATACTTCTCTCCCAACAATTCTTACCCAGTACCCCAAACTCAAAGTCCTTGATCTCAGTTTCAACCAGTTCGATGGTCCTTTTCTGAATGATCTGCTAACAATGCCCACATTGCAAGAACTTTATCTCAAAAACAATTTTCTTGTTGGAAGTATTAAGTTCTCTCCTCCTTCCCCCAATGAACCCAACCTCCGGGTTCTTGATCTTTCTCACAACCGGTTTGACGGCTATTTCCCTGATCAATTTGGGTCCTTGACTGGCCTTCAAGTACTCAATCTTGCTGGAAATAATCTCTCTGGTTCTCTGCCATCTTCCATGGCTGAGATCAGTTCCCTAGTTTTATTAGATATATCCCAAAATCACTTCACAGGTCCTTTACCGGAAAACTTATCTAACACCCTTGAAAGCTTCAATGTGTCGTACAATGATCTCTCTGGGCCTGTCCCTGAGAACCTGAAGAAGTTCCCAGATTCTTCTTTCCACCCAGGAAATTCCAGATTACAACTTCCAAATGGCTCACCTGGATCCGGCGATTTTCCAGTTGGAAACTCTACAAGGAAACCAATCAAAACTGCCATCAAAGTGGTAGTGATAGTTACATGTGTGGTCGCTGTTATCATTCTGATTCTCCTAGCCATTTTCGTACATTACATCCGGATCTCAAAGCGACCTCTGCCGGAAAATGTCACGAGCAAAGATGTTCACAAGCGTACTCCACCAAATCCTGCTGTCTTTAATGGAAGAGAAAGTGGTGGTGCTTTGGTCGTTTCAGCTGATGATCTTATGGCTTCTCGCAAGGGATCCTCATCTGAGATTATAAGCCCAGACGAAAAGTTGGCAGCTGTCACTGGTTTCTCCCCATCAAAGAACAGTCAGTTCTCATGGTCACCAGATTCCGGGGATTCATTCACCCCTGAAAACCTGGCGAGGTTGGATGTTAGGTCGCCAGACCGATTGGCTGGTGAGTTGCATTTCCTGGACGACACAATCACGCTGACACCAGAGGAACTGTCAAGGGCTCCAGCCGAAGTGTTGGGGAGGAGCAGCCATGGGACTTCTTATAGGGCAACACTGGATAACGGGGTTTTCTTGACTGTGAAGTGGTTGAGAGAAGGGGTGGCAAAGCAGAGGAAGGAGTTTGCTAAGGAGGCTAAGAAATTTGCAAATATTAGGCACCCCAATGTGGTGGGATTACGAGGGTACTATTGGGGGCCTACCCAGCATGAGAAACTCATTCTCTCGGATTATATCTCGCCTGGAAGCCTTGCAAGCTTTCTCTATGATCGACCGGGAAGAAAAGGCCCACCATTATCCTGGACCCAACGGCTCAAAATAGCCGTCGATGTTGCACGTGGCTTGAACTATCTCCATTTTGACCGTGCAGTCCCACACGGCAACCTCAAAGCAACAAACATACTTTTAGATGGGCCTGACCTTAATGCCCGTGTCGCTGATTACTGCCTCCATCGCCTCATGACCCAGGCTGGCACTGTGGAGCAGATCCTCGACGCAGGGGTCTTAGGTTATCGTGCACCAGAGTTGGCTGCACCCAAAAAGCCCTCCCCCTCCTTCAAGTCAGATGTGTATGCATTTGGGGTGGTACTGTTGGAGCTTTTAACGGGGAAGTGTGCCGGTGATGTGGTTTCTGGTGAGGAGGGTGGGGTCGATCTGACAGATTGGGTGCGATTGAGGGTGGCAGAAGGGCGTGGCTCGGATTGCTTTGATGCTGCATTAACACCAGAGATGGGTGTTCCAGCAGCAGAGAAAGGCATAAAGGAGGTGTTGGGGATAGCTTTGAGATGTATACGACCTGTTTCAGAGAGGCCAGGGATCAAATCTGTTTATGAGGATCTTTCCTCTGTATAA 3219 0.4591 MKLLLGLKMKLLRLLTLYLVFISTTAQLPSQDILTLLEFKKGIEHDPTGYILDSWNEESIDFNGCPSSWNGIVCNGGNVAAVVLDHHGLSAQADLSVFANLTMLVKLSMSNNSISGRIPINIADFKILEFLDVSDNLFSSTLPPEIGKLQNLQNLSLAGNNFSGPIPESIGGLASLQSLDFSRNSFSGSLPSSLTKLQNLVVLNVSSNGFTKRIPTGFELMPNLEVLDLHWNKFEGHIDAEFLLLSTAVHVDLSGNLLSSSSSQEQKFLPGISETIKYLNLSNNRLTGSLNGGDLSIFENLKVLDLSYNQLSGELPEFNFVYDLEVLRLSNNRFSGFVPVGLLKDGSLVLNELDLSSNNLSGPISMITSTYLRVLNLSSNEISGELPLLIGSCIVLDLSKNQFTGNLSHMLKWGNSIEFLDLSQNQLMGSIPDVTSEFLRLNYLNLSQNSLNTSLPTILTQYPKLKVLDLSFNQFDGPFLNDLLTMPTLQELYLKNNFLVGSIKFSPPSPNEPNLRVLDLSHNRFDGYFPDQFGSLTGLQVLNLAGNNLSGSLPSSMAEISSLVLLDISQNHFTGPLPENLSNTLESFNVSYNDLSGPVPENLKKFPDSSFHPGNSRLQLPNGSPGSGDFPVGNSTRKPIKTAIKVVVIVTCVVAVIILILLAIFVHYIRISKRPLPENVTSKDVHKRTPPNPAVFNGRESGGALVVSADDLMASRKGSSSEIISPDEKLAAVTGFSPSKNSQFSWSPDSGDSFTPENLARLDVRSPDRLAGELHFLDDTITLTPEELSRAPAEVLGRSSHGTSYRATLDNGVFLTVKWLREGVAKQRKEFAKEAKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPPLSWTQRLKIAVDVARGLNYLHFDRAVPHGNLKATNILLDGPDLNARVADYCLHRLMTQAGTVEQILDAGVLGYRAPELAAPKKPSPSFKSDVYAFGVVLLELLTGKCAGDVVSGEEGGVDLTDWVRLRVAEGRGSDCFDAALTPEMGVPAAEKGIKEVLGIALRCIRPVSERPGIKSVYEDLSSV* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01277 1072 SMART LRR_typ_2 321 345 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 197 220 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 221 245 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 298 320 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 536 560 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 125 149 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 513 535 IPR003591 -
Eupl02g01277 1072 SMART LRR_typ_2 173 196 IPR003591 -
Eupl02g01277 1072 Gene3D Ribonuclease Inhibitor 191 265 IPR032675 -
Eupl02g01277 1072 Pfam Leucine Rich repeat 300 314 IPR001611 GO:0005515
Eupl02g01277 1072 Pfam Leucine Rich repeat 369 385 IPR001611 GO:0005515
Eupl02g01277 1072 ProSiteProfiles Leucine-rich repeat profile. 300 322 IPR001611 GO:0005515
Eupl02g01277 1072 Gene3D Ribonuclease Inhibitor 266 625 IPR032675 -
Eupl02g01277 1072 Gene3D Transferase(Phosphotransferase) domain 1 869 1072 - -
Eupl02g01277 1072 ProSiteProfiles Protein kinase domain profile. 790 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01277 1072 Gene3D Phosphorylase Kinase; domain 1 781 867 - -
Eupl02g01277 1072 FunFam Leucine-rich repeat receptor-like protein kinase 775 867 - -
Eupl02g01277 1072 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Eupl02g01277 1072 MobiDBLite consensus disorder prediction 681 700 - -
Eupl02g01277 1072 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 28 273 - -
Eupl02g01277 1072 SUPERFAMILY L domain-like 53 390 - -
Eupl02g01277 1072 MobiDBLite consensus disorder prediction 605 632 - -
Eupl02g01277 1072 MobiDBLite consensus disorder prediction 612 631 - -
Eupl02g01277 1072 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 349 622 - -
Eupl02g01277 1072 SUPERFAMILY RNI-like 279 605 - -
Eupl02g01277 1072 FunFam Pollen receptor-like kinase 1 868 1072 - -
Eupl02g01277 1072 Pfam Leucine rich repeat 151 209 IPR001611 GO:0005515
Eupl02g01277 1072 Pfam Leucine rich repeat 513 573 IPR001611 GO:0005515
Eupl02g01277 1072 SUPERFAMILY Protein kinase-like (PK-like) 793 1069 IPR011009 -
Eupl02g01277 1072 PANTHER OS07G0626500 PROTEIN 15 1072 - -
Eupl02g01277 1072 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Eupl02g01277 1072 Pfam Protein tyrosine and serine/threonine kinase 794 992 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01277 Eupl-Chr2 28287541 28294401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01277 15 1020 Receptor kinase-like Gene Family AT4G36180 28.259 1.12e-90 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl02g01277 PK_Tyr_Ser-Thr 3.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01277 - - nnu:104590778 1661.35