Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01275 ATGAGTAACCATCGATCTGACTTTGGGAGGTCTTCTCCAGGTAATCCAAGGAAATTAAGAGAGCTATTGCTTAAAAGTGATAATCGTGTTTGTGCTGATTGTGGTGCTCCAGATCCTAAATGGGCGTCAGCAAATATTGGAGTATTTATATGCTTAAAATGTTGTGGTGTGCACAGAAGTCTTGGCACACATATCTCAAAGGTTTTGTCTGTGACATTAGATGATTGGTCTGATGATGAAATTGACTCCATGGTTGAAGTTGGTGGAAATTCTTCCGCTAATGCAATCTATGAGGCTTTTCTTCCCGAAGGATTCTCAAAGCCCGGACCAGAGTCAAGTCACGAGGAACGTATGAAGTTTATCAGGTCTAAGTATCAACTTCAAGAATTTTTGAAGCCAAGTTTGCGGATTGTCTCAGTTACTTCTGGAGGGAGCTCTCTAGACTCTAGTTTTTCTAGAAAGACTTCGGGTAGCTTACCAAGTTCAGATTCATCAAAGAAAACGGAAGGCATGGTGGAATTTATTGGATTACTGAAGGTCAAAGTGATAAAAGGAACAAATTTTGCTGTTAGAGATATGCTGTCAAGTGATCCTTACATTGTCCTGTCTCTTGGGCAGCAGAGGATCCAAACAAAAGTAATAAAGAGCAACTTGAACCCTATCTGGAATGAGGAGCTCATGCTTTCAGTTCCACAGCATTATGGGGCCCTGAAACTGCAAGTGTTTGATCATGACACCTTCTCGAAGGATGACATAATGGGGGAAGCCGAGGTTGATATCCAGCCACTGATCACATCAGCCGTGCCATTTGAAGATACAGGCATGTTTGGAAACATCCAGATTGGGAAGTGGTTGAAATCGCATGACAATGCTCTCGTCACGGACAGCATCGTCAACATTGTCGATGGGAAGGTGAAACAAGAGGTGTCACTGAAGCTTCAAAAGGTGGAATCTGGTGAAGTAGATCTAGAATTAGAGTGGATTCCTCTTGATCAGTAG 999 0.4244 MSNHRSDFGRSSPGNPRKLRELLLKSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDDWSDDEIDSMVEVGGNSSANAIYEAFLPEGFSKPGPESSHEERMKFIRSKYQLQEFLKPSLRIVSVTSGGSSLDSSFSRKTSGSLPSSDSSKKTEGMVEFIGLLKVKVIKGTNFAVRDMLSSDPYIVLSLGQQRIQTKVIKSNLNPIWNEELMLSVPQHYGALKLQVFDHDTFSKDDIMGEAEVDIQPLITSAVPFEDTGMFGNIQIGKWLKSHDNALVTDSIVNIVDGKVKQEVSLKLQKVESGEVDLELEWIPLDQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01275 332 FunFam Arf-GAP with dual PH domain-containing protein 1 12 139 - -
Eupl02g01275 332 SUPERFAMILY ArfGap/RecO-like zinc finger 17 133 IPR037278 -
Eupl02g01275 332 Pfam C2 domain 177 266 IPR000008 -
Eupl02g01275 332 Gene3D C2 domain 174 332 IPR035892 -
Eupl02g01275 332 MobiDBLite consensus disorder prediction 142 166 - -
Eupl02g01275 332 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 172 270 IPR035892 -
Eupl02g01275 332 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 9 332 IPR044518 GO:0005096|GO:0005543
Eupl02g01275 332 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Eupl02g01275 332 CDD C2_ArfGAP 175 319 - -
Eupl02g01275 332 CDD ArfGap 19 125 - -
Eupl02g01275 332 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Eupl02g01275 332 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Eupl02g01275 332 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Eupl02g01275 332 SMART C2_3c 177 272 IPR000008 -
Eupl02g01275 332 Pfam Putative GTPase activating protein for Arf 18 132 IPR001164 GO:0005096
Eupl02g01275 332 ProSiteProfiles C2 domain profile. 155 274 IPR000008 -
Eupl02g01275 332 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 174 332 - -
Eupl02g01275 332 Gene3D Arf GTPase activating protein 2 136 IPR038508 -
Eupl02g01275 332 SMART arf_gap_3 17 138 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01275 Eupl-Chr2 28155345 28185875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01275 1 332 C2H2 Transcription Factor Family AT4G21160 70.414 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01275 K12486 - msin:131243950 530.791