Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01263 ATGCTGCGGTTGATTTTATGTAAAGCATTGCTCGACACTGAAAGCTGGTCAGTGGTACATCATACAGTAATGACTTGTTTCTCTTACTTATTTAGAAGGAAGGTAGCTTCTCCAGTTGAAGTTGATGAAGAGGTTGCAGGCATTCAAAATGTTAATCTGTACACCTACAAAGAATTGAAAATTGCCACTGATGATTTTAATATAGCGAATAAAATCGGGGAAGGAGGTTTTGGTTCCGTCTACAAGGGAAAGCTTAAAGGTGGCACAATTGCTGCTATAAAGGTACTCTCGGCGGAATCAAGACAAGGGGTGCGGGAGTTTTTAACAGAGATAGATGTGATCTCGGATATAGAGCATGAAAACCTAGTTAAACTGTACGGTTGCTGCGTGGAAGGAAACCATAGAATTTTGGTCTATGGCTACCTTGAGAATAACAGCCTTGCACAAACTCTTCTTGGTGGAGGCCACTGTAGCATCCATTTTAGTTGGAGAACACGGTCTAAGATTTGCATCGGCGTTGCACGTGGGCTTTCCTTTCTCCATGAACAAGTACGGCCTTACATCGTTCATCGAGATATCAAAGCAAGCAATATACTCCTTGACAAAGACCTCAACCCCAAAATTTCAGATTTTGGTCTCGCAAAGCTTATCCCCGCCAACATGACTCATGTCAGTACACGTGTTGCAGGAACAATTGGTTATTTGGCACCCGAGTACGCAATACAGGGACAGTTGACACGGAAAGCCGATATTTACAGTTTTGGTGTTCTCCTCTTGGAAATAGTCAGTGGGAGATGCAACACGAACACACGGTTACCTGTTGAAGAACAATATCTTCTTGAAAGGACATGGGTGCTGCACGAGCGGCGGGAGCTGGTGGGTCTGGTGGACACATCGTTGAATGGGGACTTCGACGCTGAGGAGGCTTGCAAGTTCCTGAAGATTGGTCTCCTGTGCACACAAGACATACCAAAGCTCCGGCCTTCCATGTCGACCGTGGTCAGGATGCTGACAGGTGAGGTGGATGTGAATAACAAGAAGATCACGAAGCCTGGCCTCATCTCTGATTTCATGGACCTCAAAGTTAGAGGCCTAAGCGAGAAGACTGACACAGACAATACGTCAGGCATGATTTCCTCTGGCACAGACAGGCCGGATAGTTTATCCTTCTCGTTGGGAAACACCAACACCTCCTCTTACGGGACCATGACCTTCACTGCAATATCTGATCGGAGCTATTGA 1242 0.4581 MLRLILCKALLDTESWSVVHHTVMTCFSYLFRRKVASPVEVDEEVAGIQNVNLYTYKELKIATDDFNIANKIGEGGFGSVYKGKLKGGTIAAIKVLSAESRQGVREFLTEIDVISDIEHENLVKLYGCCVEGNHRILVYGYLENNSLAQTLLGGGHCSIHFSWRTRSKICIGVARGLSFLHEQVRPYIVHRDIKASNILLDKDLNPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIQGQLTRKADIYSFGVLLLEIVSGRCNTNTRLPVEEQYLLERTWVLHERRELVGLVDTSLNGDFDAEEACKFLKIGLLCTQDIPKLRPSMSTVVRMLTGEVDVNNKKITKPGLISDFMDLKVRGLSEKTDTDNTSGMISSGTDRPDSLSFSLGNTNTSSYGTMTFTAISDRSY* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01263 413 Pfam Protein kinase domain 67 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01263 413 ProSiteProfiles Protein kinase domain profile. 66 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01263 413 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Eupl02g01263 413 Gene3D Transferase(Phosphotransferase) domain 1 142 353 - -
Eupl02g01263 413 Gene3D Phosphorylase Kinase; domain 1 36 141 - -
Eupl02g01263 413 FunFam cold-responsive protein kinase 1 37 141 - -
Eupl02g01263 413 SUPERFAMILY Protein kinase-like (PK-like) 47 337 IPR011009 -
Eupl02g01263 413 SMART serkin_6 66 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01263 413 MobiDBLite consensus disorder prediction 368 390 - -
Eupl02g01263 413 FunFam cold-responsive protein kinase 1 142 353 - -
Eupl02g01263 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Eupl02g01263 413 CDD STKc_IRAK 72 339 - -
Eupl02g01263 413 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 373 - -
Eupl02g01263 413 MobiDBLite consensus disorder prediction 369 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01263 Eupl-Chr2 27589114 27597187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01263 30 340 Receptor kinase-like Gene Family AT1G07650 56.230 7.42e-115 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g01263 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01263 - - zju:107423327 597.816