Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01258 ATGGGTTTCAAGCCTCTGGTCTGGTATTGTCAGCCTGTTGCAAATGGGATATGGGCAACAGTGGAGAATGCCTTTGGTGTTTACACGCCTTGCGGTTTGGACACTCTGGTGGTTTGCATCTCTCATTTGGTTCTTATGGGTTTGTGCTTTTATCGAACATGGAGGATTAAGAAAGATAAAACGGTCCAGAGGTTCTGTTTGAAGTCGAATTACTACAATTATATGTTGTGGCTATTGGCTGCTTATTGTACTGCGGAGCCATTGTTCAGGTTGGTCATGGGCATTTCAATCTTTAATCTAGATGGACAGACTGGCCTCGCTCCTTTTGAGATAGTTTCTCTGCTCATTGAGGCTCTTGCTTGGTGCTCTATGCTGGTAATGATTATTGTAGAGACTAAAGTCTACATCTATGAGTTACGGTGGTATGTTCGATTTGGAGTCGTTTACATTCTGATAGGGGAGGCTGCCATGCTCAATCTTGTTCTCTCAGTTAAAGAGTACTATAACAAATCTGTATTGTATTTGTACATCAGTGAGGTTTTCTGCCAGGTCTTGTTTGGAATTTTCTTGCTGATATACATTCCTAGTTTGGAGCGTTATCCGGGCTACAATCCAATAAGGGACGAGTCTGTTGACAACACAGAGTATGAAGCACTTCCTGGAGGAGAGCAGATCTGTCCAGAGAGGCATGTGAGCATATTTTCCCAGATATATTTTGGATGGATGACTCCCCTCATGCAGCAAGGATATAAAAGACCCATCGCTGAGAAGGATGTCTGGAAACTAGATACGTGGGATCTGACTGAGACACTAAATAGCAAGTTTCAGAGATGCTGGCTTGAAGAATCTCGAAGGCCCAAACCATGGCTGTTGAGAGCACTAAATCGTAGCCTTGGCGGAAGATTTTGGTGGGGAGGTGTCTTCAAGATTGGCAATGATCTTACTCAGTTTGTGGGGCCAGTGGTATTGAATCTCTTGTTACAGTCTATGCAACAAGGGGATCCAGCTTGGATTGGTTACATCTATGCCTTCTCAATTTTTGCTGGAGTGGTAGTCGGAGTGCTATGTGAAGCACAGTATTTCCAGAATGTTATGCGTGTGGGTTTCCGGCTAAGGTCAACCTTGGTTGCTGCTGTGTTTCGCAAATCTTTGAGGCTAACACATGAGGGTCGCAAGAAGATTGCATCTGGAAAAATTACCAACTTGATGACCACAGATGCAGAAGCACTTCAGCAAATATGCCAACAGCTTCATGGCTTATGGTCAGCTCCATTCCGTATCATCATTTCTATGGTTCTTCTGTACAATGAACTAGGTGTTGCTTCACTTTTGGGCTCATTCATGCTAGTCCTTATGTTTCCTATACAGACATTTGTGATAAGCAAAATGCAGAAACTGTCTAAGGAGGGTTTACTGCGTACTGACAAGAGAATTGGCCTCATGAATGAAATCTTGGCCGCCATGGACACTGTGAAATGTTATGCATGGGAGCAGAGCTTTCAGTCTAAAGTCCAAAGCGTTCGAAATGATGAGCTCTCATGGTTCCGGAAAGCTCAACTTCTTGGAGCGTGTAATAGTTTCATCCTAAACAGCATTCCAGTTGTGGTTACGGTGATTTCATTTGGGATGTTCACATTGCTTGGAGGGGAATTGACACCTGCGAGGGCTTTTACATCACTTTCCCTGTTTGCAGTGTTACGGTTCCCCTTGTTCATGCTTCCTAACTTGATAACGCAGGTCGTAAATGCAAATGTATCATTGAAACGTTTGGAGGAACTATTCTTAGCTGAAGAGAGAATTCTTTTGCCAAACCCACCCCTTGAGCCAGGGCTCCCAGCTATCTCGATCAAGGATGGATACTTCTCTTGGGATTCAAAGGCAGAGAAACCCACCTTATCAAACATTAATTTGGATATACCGGCTGGTAGCCTAGTGGCAATTGTTGGCAGTACTGGAGAAGGAAAAACGTCATTGATATCAGCAATGCTCGGGGAAGTACCTCCAATGGCAGATTCAAGCGTTGTTCTTCGGGGAACTGTTGCTTATGTTCCACAAGTTTCCTGGATTTTCAATGCAACTGTACGTGAGAACATATTATTTGGATCTGTTTTTGAACCGGCACGATATGAGAAGGCAATAGAAGTGACTGCCTTGCAGCACGACCTTGACTTATTGCCTGGTGGTGATCTCACAGAAATTGGGGAAAGGGGGGTGAATATTAGTGGTGGGCAAAAGCAAAGAGTTTCCATGGCTAGGGCTGTATATTCCAACTCAGACGTATGCATTTTTGATGACCCCTTAAGTGCCCTAGATGCTCATGTTGGTCGACAGGTCTTTGAGAAATGTATCAAAGAAGAACTGCGAGGAAAAACCAGAGTGCTCGTCACAAACCAGCTCCATTTTCTCCCACAGGTGGACAGAATTCTCCTGGTTCATGAAGGTATGGTGAAAGAGGAGGGAACCTTCGAGGAACTTACTAATAGTGGGGTACTGTTTCAAAAATTAATGGAAAATGCGGGGAAAATGGAGGAACATGTGGAAGAAAAGGACGAAGGTGAGGACCGTGACCAGAAGACTCCGAAACCTGCTGCCAATGGGGAAGTGAATGGGTTATCAGAAAATGGAAGTCATTCAAATAAAGGGAAAGAAGGCAAGTCTGTTCTTATCAAGCAGGAAGAACGTGAAACAGGTGTTGTCAGTTGGAAAGTCCTGATGAGGTATAAAAATGCATTAGGGGGCCTTTGGGTGGTTATGATACTCTTAATCTGCTATATCTCAACTGAAGTTCTTCGAATTTTCAGTAGCACGTGGCTAAGTGTTTGGACTGATCAAAGCACTCCAAAGAGCAATGGGCCTGGTTTCTATAATCTGGTTTATGCGCTTTTATCTTTTGGTCAGGTACTAGTGACATTGACAAACTCGTATTGGTTGATCATTTCGAGTCTTTATGCTGCCAGAAGATTGCATGAGGCCATGCTTCACTCTATATTGAGAGCTCCAATGGTATTCTTTCACACAAATCCGATCGGACGGATAATTAATAGATTTGCAAAGGATCTAGGTGATATAGATCGAAATGTTGCTGTGTTTGTGAATATGTTTCTGAGCCAAGTGTCACAGCTCCTTTCAACTTTTGTGCTGATAGGCATCGTGAGCACCTTATCCCTATGGGCCATAATGCCACTTCTGATCTTGTTTTACGCAGCCTATCTATATTATCAGAGCACAGCCCGTGAAGTAAAACGCTTGGATTCCATAACGAGATCGCCTGTCTATGCACAATTTGGGGAAGCATTAAATGGTCTATCCACCATTCGTGCATATAAAGCCTATGATCGAATGGCTAGTATTAATGGAAAATCAATGGACAGTAATGTCAGATTCACCCTTGTGAACAATAGTGCGAACCGCTGGCTTGCTATCCGTTTGGAAACATTGGGAGGCATCATGATTTGGTTAACGGCAACCTTTTCCGTCATGCAGAACGAACGGGCAGAAAACCAGGTGGCCTTTGCATCTACGATGGGTTTGCTTCTTAGTTATGCTTTAAATATCACGAACCTGTTGACTGCTGTTCTAAGACTTGCAAGTTTGGCCGAGAATAGTTTAAATGCTGTTGAGCGTATGGGCACATATATAGAGTTGCCTTCTGAGGCTCCAGCTGTTATTGAAAACAACCGGCCCCCTCCCGGATGGCCTTCATCAGGATCGATCAAGTTTGACCATGTTGTCCTTCGGTACAGGCCTGAACTTCCTCCGGTCCTCCACGGCTTGTCTTTCACAATTTCTCCAAGTGAAAAAGTAGGAATAGTTGGGAGGACTGGGGCTGGGAAATCTAGTATGCTCAACGCTTTATTTCGGATTGTGGAACTAGAAAGAGGAAGAATCTTGATTGATGATTGCGATATTGCGAAGTTCGGTTTGACAGATTTACGTAAAGTTCTTGGAATTATACCACAATCGCCAGTTCTTTTCTCAGGAACTGTCCGTTTTAATCTTGATCCTTTTAATGAGCACAATGATGCTGACCTTTGGGAGGCATTAGAGAGAGCACATCTAAAGGATGTCATCAGGAGGAACTCTTTGGGTCTCGATGCTGAGGTTTCTGAGGCAGGGGAGAATTTCAGTGTTGGACAGAGGCAACTGTTAAGTCTTGCTCGTGCATTGCTGCGGAGATCAAAGATTCTTGTTCTTGATGAAGCAACTGCAGCCGTTGATGTTAGAACTGATGCTCTTATCCAGAAAACCATTAGAGAAGAATTTAAATCATGCACCATGCTCATTATTGCTCACCGATTAAATACTATCATTGATTGCGACCGAGTTCTTCTACTTGATGGTGGTCAGGTTCTAGAATTTGATACCCCTGAGGATCTCCTGTTAAACAAAGGGAGCGCTTTCTCTAAGATGGTTCAAAGTACAGGAGCTGCAAATGCTCAATACTTACGGAGCTTAGTCCTTGGTGGTGAAGGGGAGAACAATTCAGGCAGAGAAGAGACCAAGCGGCAAGATGGGCAGAGGAGATGGCTGGCCTCCTCCCGCTGGGCGGCTGCTGCCCAGTTTGCACTTGCTGTTAGCCTCACTTCTTCACATAACGACCTGCAACAATTGGAGATTGAAGACGAGAACAGCATCCTGAGGAAGACCAAGGATGCTGTCATCACGCTGCAGGGTGTTTTGGAAGGGAAGCATGACAAGGTTATCGAAGAGACGCTAAATCAGTACCAGGTTCCTAAAGATAGGTGGTGGTCAGCTCTCTACAAAATGGTTGAAGGTCTCGCAACGATGAGCAGGTTGGCTCGCAACAGGCTTCAACAATCTGAATATGGGTTTGAAGACAAATCAATCAATTGGGACCATGTGGAGACGTAG 4872 0.4425 MGFKPLVWYCQPVANGIWATVENAFGVYTPCGLDTLVVCISHLVLMGLCFYRTWRIKKDKTVQRFCLKSNYYNYMLWLLAAYCTAEPLFRLVMGISIFNLDGQTGLAPFEIVSLLIEALAWCSMLVMIIVETKVYIYELRWYVRFGVVYILIGEAAMLNLVLSVKEYYNKSVLYLYISEVFCQVLFGIFLLIYIPSLERYPGYNPIRDESVDNTEYEALPGGEQICPERHVSIFSQIYFGWMTPLMQQGYKRPIAEKDVWKLDTWDLTETLNSKFQRCWLEESRRPKPWLLRALNRSLGGRFWWGGVFKIGNDLTQFVGPVVLNLLLQSMQQGDPAWIGYIYAFSIFAGVVVGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKIASGKITNLMTTDAEALQQICQQLHGLWSAPFRIIISMVLLYNELGVASLLGSFMLVLMFPIQTFVISKMQKLSKEGLLRTDKRIGLMNEILAAMDTVKCYAWEQSFQSKVQSVRNDELSWFRKAQLLGACNSFILNSIPVVVTVISFGMFTLLGGELTPARAFTSLSLFAVLRFPLFMLPNLITQVVNANVSLKRLEELFLAEERILLPNPPLEPGLPAISIKDGYFSWDSKAEKPTLSNINLDIPAGSLVAIVGSTGEGKTSLISAMLGEVPPMADSSVVLRGTVAYVPQVSWIFNATVRENILFGSVFEPARYEKAIEVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVCIFDDPLSALDAHVGRQVFEKCIKEELRGKTRVLVTNQLHFLPQVDRILLVHEGMVKEEGTFEELTNSGVLFQKLMENAGKMEEHVEEKDEGEDRDQKTPKPAANGEVNGLSENGSHSNKGKEGKSVLIKQEERETGVVSWKVLMRYKNALGGLWVVMILLICYISTEVLRIFSSTWLSVWTDQSTPKSNGPGFYNLVYALLSFGQVLVTLTNSYWLIISSLYAARRLHEAMLHSILRAPMVFFHTNPIGRIINRFAKDLGDIDRNVAVFVNMFLSQVSQLLSTFVLIGIVSTLSLWAIMPLLILFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMASINGKSMDSNVRFTLVNNSANRWLAIRLETLGGIMIWLTATFSVMQNERAENQVAFASTMGLLLSYALNITNLLTAVLRLASLAENSLNAVERMGTYIELPSEAPAVIENNRPPPGWPSSGSIKFDHVVLRYRPELPPVLHGLSFTISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDCDIAKFGLTDLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRVLLLDGGQVLEFDTPEDLLLNKGSAFSKMVQSTGAANAQYLRSLVLGGEGENNSGREETKRQDGQRRWLASSRWAAAAQFALAVSLTSSHNDLQQLEIEDENSILRKTKDAVITLQGVLEGKHDKVIEETLNQYQVPKDRWWSALYKMVEGLATMSRLARNRLQQSEYGFEDKSINWDHVET* 1624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01258 1623 Gene3D - 609 862 IPR027417 -
Eupl02g01258 1623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1472 IPR003439 GO:0005524
Eupl02g01258 1623 FunFam ABC transporter C family member 2 608 854 - -
Eupl02g01258 1623 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 303 582 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01258 1623 MobiDBLite consensus disorder prediction 842 861 - -
Eupl02g01258 1623 SUPERFAMILY ABC transporter transmembrane region 286 594 IPR036640 GO:0005524|GO:0016020
Eupl02g01258 1623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1471 IPR027417 -
Eupl02g01258 1623 SUPERFAMILY ABC transporter transmembrane region 914 1218 IPR036640 GO:0005524|GO:0016020
Eupl02g01258 1623 Pfam ABC transporter transmembrane region 305 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01258 1623 Pfam ABC transporter transmembrane region 918 1166 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01258 1623 CDD ABCC_MRP_domain2 1236 1456 - -
Eupl02g01258 1623 Gene3D ABC transporter type 1, transmembrane domain 880 1219 IPR036640 GO:0005524|GO:0016020
Eupl02g01258 1623 Gene3D ABC transporter type 1, transmembrane domain 280 600 IPR036640 GO:0005524|GO:0016020
Eupl02g01258 1623 CDD ABC_6TM_ABCC_D1 304 590 IPR044746 GO:0140359
Eupl02g01258 1623 CDD ABCC_MRP_domain1 614 814 - -
Eupl02g01258 1623 ProSitePatterns ABC transporters family signature. 1375 1389 IPR017871 GO:0005524|GO:0016887
Eupl02g01258 1623 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 228 1478 - -
Eupl02g01258 1623 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01258 1623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 838 IPR003439 GO:0005524
Eupl02g01258 1623 MobiDBLite consensus disorder prediction 842 887 - -
Eupl02g01258 1623 FunFam ABC transporter C family member 2 278 599 - -
Eupl02g01258 1623 Pfam ABC transporter 632 767 IPR003439 GO:0005524
Eupl02g01258 1623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 837 IPR027417 -
Eupl02g01258 1623 FunFam ABC transporter C family member 2 881 1219 - -
Eupl02g01258 1623 SMART AAA_5 641 819 IPR003593 GO:0016887
Eupl02g01258 1623 SMART AAA_5 1264 1457 IPR003593 GO:0016887
Eupl02g01258 1623 Gene3D - 1221 1474 IPR027417 -
Eupl02g01258 1623 FunFam Multidrug resistance-associated protein member 4 1222 1474 - -
Eupl02g01258 1623 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524|GO:0016887
Eupl02g01258 1623 Pfam ABC transporter 1255 1403 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01258 Eupl-Chr2 27302861 27380194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01258 603 825 Calmodulin-binding Proteins AT2G36910 29.876 5.94e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01258 - - nnu:104588335 2789.99