Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01247 ATGGCCGCCTCTCGCGCCAGGACGCGTGTTGGGAAGTACGAGCTTGGTCGGACACTCGGTGAGGGCACGTTCGCGAAGGTGAAGTTCGCTCGCAACGTTGACACGGGAGAAAACGTTGCCATCAAGATCCTTGATAAGGACAAGATTTTGAAGCATAAGATGATCGGTCAGATTAAACGTGAAATCTCGACCATGAAATTGATCAGACACCCAAATGTCATACGTATGTATGAGGTGATGGCTAGCAAGACAAAGATATACATTGTTTTGGAATTTGTGACTGGTGGTGAACTCTTTGACAAAATTGCTTCACATGGGAGATTCAAGGAGGATGAAGCAAGAAAGTATTTTCAGCAGCTCATCAATGCCGTGGATTACTGCCACAGCAGAGGTGTTTTTCATAGGGACCTCAAGCCTGAGAATCTACTGTTGGATGCTAATGGGATTCTTAAAGTCTCAGATTTTGGACTAAGTGCACTGCCTCAGCAAGTTCGAGAAGATGGGTTGCTTCATACAACGTGCGGGACACCAAATTATGTTGCTCCAGAGGTGGTTAACAACAAAGGTTATGATGGAGCGAAGGCAGATCTGTGGTCATGCGGTGTAATCCTTTTCGTCCTTTTGGCAGGCTATTTGCCTTTTGAAGAATCTAACCTAATGGCATTATATAAAAAGATCTTTAAGGCCGATTTTACTTGTCCTCCATGGTTCTCCTCAAGTGCAAAGAAACTAATCAAAAGGATCCTGGACCCAAATCCCTTGACGCGAATTACAATTGCCGAGGTCATAGAGAATGAATGGTTTATGAAAGGATATAAACCGCCTAGCTTTGAAGCAGCAGACGTTACTCTCGATGACGTGGATGCTATTTTCAACGAATCCGAGGATTCTGGAAATCTCGTTGTCGAGAGGCGAGAAGAAAAGCCAGTCACCATGAATGCTTTCGAGCTCATCTCTACATCTCAGGGTCTCAATCTCAGCACTCTATTTGAAAAACAGATGGGACTTGTTAAAAGGGAAACCAGATTTACATCCAAATGCCCTGCCAATGAGATAATCTCAAAAATTGAGGAAGCCGCAATGCCTTTGGGATTTGATGTGAAGAAAAAGAACTACAAGATGAAGCTTCAAGGGGCAAAAACCGGACGGAAGGGCCATTTAGCCATTGCAACGGAGATTTTTGAGGTTGCTCCTTCACTGTACATGGTCGAGCTTCGTAAAGATGGAGGAGATACTCTGGAATTTCACAAGTTTTACAAGAACCTCTCGACTGGGTTGAAAGATATTGTCTGGAAATCGGGGGAGGAAACGAAGGAATTGAATGATGGTACGTATACAGTTACAATTAGGAAATAG 1356 0.4388 MAASRARTRVGKYELGRTLGEGTFAKVKFARNVDTGENVAIKILDKDKILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASHGRFKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDANGILKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVVNNKGYDGAKADLWSCGVILFVLLAGYLPFEESNLMALYKKIFKADFTCPPWFSSSAKKLIKRILDPNPLTRITIAEVIENEWFMKGYKPPSFEAADVTLDDVDAIFNESEDSGNLVVERREEKPVTMNAFELISTSQGLNLSTLFEKQMGLVKRETRFTSKCPANEIISKIEEAAMPLGFDVKKKNYKMKLQGAKTGRKGHLAIATEIFEVAPSLYMVELRKDGGDTLEFHKFYKNLSTGLKDIVWKSGEETKELNDGTYTVTIRK* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01247 451 CDD CIPK_C 313 428 - -
Eupl02g01247 451 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Eupl02g01247 451 FunFam Non-specific serine/threonine protein kinase 6 309 - -
Eupl02g01247 451 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01247 451 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01247 451 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Eupl02g01247 451 Gene3D Kinase associated domain 1, KA1 306 432 - -
Eupl02g01247 451 SUPERFAMILY Protein kinase-like (PK-like) 10 276 IPR011009 -
Eupl02g01247 451 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01247 451 CDD STKc_SnRK3 12 267 - -
Eupl02g01247 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Eupl02g01247 451 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Eupl02g01247 451 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Eupl02g01247 451 Gene3D Transferase(Phosphotransferase) domain 1 93 274 - -
Eupl02g01247 451 Pfam NAF domain 309 369 IPR004041 GO:0007165
Eupl02g01247 451 FunFam Non-specific serine/threonine protein kinase 306 432 - -
Eupl02g01247 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01247 Eupl-Chr2 26710270 26717938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01247 2 439 CBL-interacting serine-threonine protein kinases AT1G01140 70.495 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Eupl02g01247 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01247 - - rvl:131314866 796.578