Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01242 ATGACTGCGTTTTTCACTTCTAAATGGTCCACCGTGGGCCGTTCATTTTTGGGGAGCCTTGGCTGCAATTCTTCTGGTTTGCTGATAACATCACATGAGATGATGACAAAGTTGACTTCCAGCAATTTCTTATCTCAGCAGCTAAGGACATTCATACAGATGAGGACCAATCTTAAAGTTGTGGATAACTCAGGAGCAAAGCGGGTTATGTGCATACAAGCCTTGAAGGGGAAGAAAGGGGCGAGGTTGGGAGACACAATAATAGCATCAGTAAAGGAAGCCCAACCTCGTGGCAAAGTGAAGAAGGGAGATGTTGTCTATGGTGTGGTTGTGCGTGCCGCCATGCAGCGGGGCCGCTGTGATGGGAGTGAGATCAAGTTTGATGACAATGCAGTAGTCCTTGTCAACAAGCAAGGAGAGCCAATTGGAACTCGGGTTTTTGGGCCGGTCCCACATGAGCTGAGGAAGAAAAAGCATGTGAAAATTCTTACTTTGGCAGAGCATATTGCCTGA 513 0.4717 MTAFFTSKWSTVGRSFLGSLGCNSSGLLITSHEMMTKLTSSNFLSQQLRTFIQMRTNLKVVDNSGAKRVMCIQALKGKKGARLGDTIIASVKEAQPRGKVKKGDVVYGVVVRAAMQRGRCDGSEIKFDDNAVVLVNKQGEPIGTRVFGPVPHELRKKKHVKILTLAEHIA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01242 170 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 52 169 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl02g01242 170 SMART Ribosomal_L14_2 51 170 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl02g01242 170 SUPERFAMILY Ribosomal protein L14 52 169 IPR036853 GO:0003735|GO:0005840|GO:0006412
Eupl02g01242 170 NCBIfam 50S ribosomal protein L14 52 169 IPR005745 GO:0003735|GO:0006412|GO:0015934
Eupl02g01242 170 Hamap 50S ribosomal protein L14 [rplN]. 51 170 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl02g01242 170 ProSitePatterns Ribosomal protein L14 signature. 108 134 IPR019972 -
Eupl02g01242 170 FunFam 50S ribosomal protein HLP, mitochondrial-like 51 170 - -
Eupl02g01242 170 Pfam Ribosomal protein L14p/L23e 52 169 IPR000218 GO:0003735|GO:0005840|GO:0006412
Eupl02g01242 170 Gene3D Ribosomal protein L14 51 170 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01242 Eupl-Chr2 26512720 26539217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01242 39 153 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 35.246 6.40e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01242 K02874 - msin:131243130 271.937