Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01225 ATGTTCGAGTTCCTGCCGGATTCAGACGGTGAGATCGGTTCAGAAACCCTAAATTCCAGCCAGAGCTCGATGAGCTGCGATAGTTGTAGCAGCTTCAGTCGACTTTCCTTCGACGCTCTCGAATTCCCGACCAAAACGTCTTCTTACTCGCGGGAAAATTCCACATTGAAGCCTCACCGGTCATCGGATTTTGCTTGGGAAGCCATACGTTCGGCCACTTTTCGCCGGAAAAATGGCTTGAATTTCAGAGATTTCAAGCTCGTCCGACAGATCGGGAGCGGCGACATCGGGAACGTTTATCTCTGCCGTTTGAGGAACTCCACAGCTGGCGAGGAGAACTGCTTTTACGCCATGAAAGTAGTGGATAAAGAAGCTCTGGCATTGAAGAATAAGATCGCGAGGGCAGAGACAGAGAAGAGGATTTTGAAGATGTTGGATCATCCCTTCCTTCCCACTCTCTACGCAGAATTCGAAGCTTCGCATTTCTCTTGCGTCGTCATGGAGTTCTGCTCTGGTGGAGATTTGCATAATCTCAGACACCAACAGCCTGGAAAACGCTTCTCTTTGAGCTCGGCAAGGTTTTACGCGGCGGAGGTTCTCGTAGCTCTGGAATACCTCCACTTGCTGGGAATCATCTACAGAGATCTTAAGCCTGAGAACGTGTTGGTCAGGTCAGACGGTCACATCATGCTCTCCGATTTTGACCTTTCTCTCCGTTGTAATGCAGTCCCAGCCGTCGAATCACCCGACTCCTCACCCGATCCTACCACCACTGCACGCCGACCCTCTTCCCAAACACCTTCATCCTCATTTTCTTGCCTCTCCAACCGGTTATTCCGGTCTCGGAAGGTACGGACTGTTGCATGTAATCGGCAGTTTGTGGCGGAGCCGGTATCTGCCCGATCCAACTCCTTCGTCGGGACCCATGAGTACGTGTCCCCGGAAGTGGCCGCCGGGAAATCACACGGTAACGCCGTAGACTGGTGGGCCCTCGGGATCTTCATCTACGAGTTGATTTACGGACATACGCCTTTTTCAGGCGAGACTAACGAGGCGACGCTGCGGAACATTGTGAAAAAACCGTTGGTGTTCCCGATGGAATCTCCAACTAGTGGACTTGAGATGTACGCTCGAGATCTGGTATCGAAACTTTTGGTAAAAGATCCGGAGAGTAGGCTGGGGTCAAAGAGAGGCGCTGCTGACGTGAAGACACATCCCTTCTTCAAAGAACTGAACTTCGCTCTTTTACGGACGTACTCGCCGCCGGGGATTCCAGGCCTCCGGCGGACAAGGACGTCGACATCGTTGTGCCATCTTAGAAGTAAGAATGCATCAGCAGCGTTTGATTACTTTTGA 1356 0.5162 MFEFLPDSDGEIGSETLNSSQSSMSCDSCSSFSRLSFDALEFPTKTSSYSRENSTLKPHRSSDFAWEAIRSATFRRKNGLNFRDFKLVRQIGSGDIGNVYLCRLRNSTAGEENCFYAMKVVDKEALALKNKIARAETEKRILKMLDHPFLPTLYAEFEASHFSCVVMEFCSGGDLHNLRHQQPGKRFSLSSARFYAAEVLVALEYLHLLGIIYRDLKPENVLVRSDGHIMLSDFDLSLRCNAVPAVESPDSSPDPTTTARRPSSQTPSSSFSCLSNRLFRSRKVRTVACNRQFVAEPVSARSNSFVGTHEYVSPEVAAGKSHGNAVDWWALGIFIYELIYGHTPFSGETNEATLRNIVKKPLVFPMESPTSGLEMYARDLVSKLLVKDPESRLGSKRGAADVKTHPFFKELNFALLRTYSPPGIPGLRRTRTSTSLCHLRSKNASAAFDYF* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01225 451 MobiDBLite consensus disorder prediction 245 271 - -
Eupl02g01225 451 CDD STKc_phototropin_like 83 425 - -
Eupl02g01225 451 FunFam protein kinase PINOID 2 83 169 - -
Eupl02g01225 451 Gene3D Transferase(Phosphotransferase) domain 1 170 238 - -
Eupl02g01225 451 FunFam protein kinase PINOID 170 238 - -
Eupl02g01225 451 MobiDBLite consensus disorder prediction 250 271 - -
Eupl02g01225 451 SUPERFAMILY Protein kinase-like (PK-like) 63 424 IPR011009 -
Eupl02g01225 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Eupl02g01225 451 MobiDBLite consensus disorder prediction 1 24 - -
Eupl02g01225 451 ProSiteProfiles Protein kinase domain profile. 85 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01225 451 Coils Coil 118 145 - -
Eupl02g01225 451 SMART serkin_6 85 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01225 451 Pfam Protein kinase domain 86 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01225 451 Pfam Protein kinase domain 302 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01225 451 FunFam serine/threonine-protein kinase D6PK-like 300 426 - -
Eupl02g01225 451 Gene3D Phosphorylase Kinase; domain 1 83 169 - -
Eupl02g01225 451 PANTHER FLIPPASE KINASE 1-RELATED 26 428 - -
Eupl02g01225 451 Gene3D Transferase(Phosphotransferase) domain 1 301 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01225 Eupl-Chr2 26124785 26127893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01225 4 451 AGC Kinase Gene Family AT2G34650 63.778 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl02g01225 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01225 - - nnu:104588346 700.664