Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01218 ATGACGACACTAAATATTATTCCTTCTTGTTTCATAACAATTTGTTACTTTTTCATCTTCGTAAGATCACTGAATCAAGAGGGAAATTTGCTTCTTGAGTTCAAGACCAGTCTGATTGACAACAATGAAACCCTTCAAAGCTGGAGTCCTTCGGATTTAACTCCTTGCCGTTGGAACGGTATAGACTGTACTGATTATAAGGTAACTTCTATAAATCTCCATCTCTTCAATTTGTCTGGTACTTTATCTTCCTTCGTCTGTAAATTCGATCGTTTAATCGTGCTAAATGTGTCGGAGAATTTCATTTCCGGTCCTTTACCTAAAGATTTTGCTTACTGTGCTAATCTAGAGGTTCTAGACCTTAGCTCAAATAGGTTTCATGGGGAAATACCGCCTCACCTCTGCCGAATTTCTACCCTAAGAGTTCTTTTTCTGAGTGAGAATTTTCTTTATGGTCGAATTCCCGAAGAGATTGGAAATCTGATGTTGCTCGAAGAGCTTGTCATTCACAGTAATAATCTCACCGACGCCATCCCCTCGTCGATTGGTATGTTGAAAAAGCTTAGGATTATTAGAGCGGGTCGAAATGCCCTCTCGGGTCCGATACCTGTGAAAATCAGCGAATGCGAAAGCCTAGAGATTCTAGGATTGGCGCAGAATAGGCTTGAAGATCCTCTTCCTAGGGAGTTTCTGAGGCTTCAGAATCTGACCACATTGATTCTCTGGCAAAATCTTTTATCTGGTCAGATTCCTCCGGAGCTCGGGAGTTGCAGTAACCTGGAGTTGCTTGCCTTGAATGACAATGCTTTCAGTGGAAGCATTCCCAAAGAGCTTGGGAAATTATCCAAGCTGAAAAAGTTGTACATTTATACCAACCGGTTGAATGGAACAATTCCATCGGAATTAGGAAATTGTGTAAGTGCAGCTGAGATCGATCTTTCTGAGAATCAGTTAACGGGATTCATTCCTATGGAACTGAATCAGGTTCCAAATCTTCGGTTGCTTCATCTTTTTGAAAACCTTCTGCAGGGAAGTATTCCCAGGGAGCTTGGACGCTTAGAACAGCTGAGGAAGTTAGATTTATCGATCAATAATTTGACAGGAACTATTCCGTTAGAGTTTCAGAACCTTACCTTCTTGGAGGATTTACAACTCTTTGACAATAATCTTGAGGGTACCATTCCACCTCTCCTCGGGGCTAGCAGTAATCTCTCTGTTCTTGACATGTCTGAGAATAACTTTGTAGGTAATATACCTGCCCAACTCTGCAAGTTCCAAAAGTTGATGTTTCTCAGCCTCGGGTCAAATTTTTTATCTGGTAACATTCCTTATGGGCTGAAAACATGCAAGTTTCTTGTACAGCTAATGCTAGGAGATAACCAGCTTACAGGAAGCCTCCCTGTTGAATTATCCAACCTTAGGAATCTTTCTGCACTTGAACTCTATCAAAATCGATTCTCTGGGCCAATATCCTCAGAAGTAGGCAAGCTCAAAAACCTAGAGAGACTCCTCCTGTCGGATAACTATTTTGTTGGTAATATTCCTCCTGAGATTGGAGAATTGGTGCGGCTTGTTAGCTTCAATATTTCTTCTAACCAGCTCTCGGGAAGTATTCCCCATGAGCTAGGGAACTGTACAGAACTCCAGAGGCTAGATCTTAGCAGGAACCAATTCACTGGCAATGTCCCAGAAGAACTTGGCAATCTGGTGTCTCTGGAATTGCTCAAGCTCTCCGATAACATACTGAATGGAGCCATACCCAATACTTTAGGGCGATTGTCCCGGCTTACAGAATTGCAAATGGGAGGGAATTATTTGTCTGGTCGTATACCTGTTCAGTTGGGCCAGCTTAGTGCTCTGCAGATTGCCCTGAACATTAGCCACAATGCGCTTTCCGGAGGAATTCCAGATGATCTGGGAAACTTACAGATGTTGGAATCCCTCTACTTGAACAACAATCATCTGGATGGTGAAATTCCTACTTCAATTGGTGGGCTCTTAAGCCTCTGGGTCTGCAACCTTTCTCACAATAACCTGGTAGGATTATTACCCAACACCCCTGTATTCCAAAGGATGGATGCCAGCAATTTTTTCGGAAATGATGGCCTGTGCAGATTAGGGTCAAACTCTTGCCATCCATCTTTGCCCCCATCTCTTGCCACACATCGAAGTTGGATTGAGCAGGGTTCATCGAAGGAGAAAATAGTGAGCATCACTGCAGTAATCATAGGATTAATTTCCTTGGCCCTCACTGTGGGTGTTTGCTGGATTCTAAAGCGACGCAAGCCTGTTTTTGTTGCATTCGACAATCCTATGAAGCCTGATGTATCCGATAGCTATTATTTCCCCAAAGAAGGTTTCACATATCAGGACCTTCTGGAAGCTACCAGTTATTTCTCGGAGAGTGCAGTTATAGGGAGTGGAGCTTGTGGTACAGTGTACAAGGCTGTTATGTCCGATGGCGAGTTGATTGCCGTCAAGAAGCTGAAATCCTGTGGAGAAGCTTCCAATGTTGACAGCAGCTTCCAGGCTGAGATATCAACACTCGGAAAGATCAGACACCGCAACATCGTGAAGCTTTATGGTTTCTGCTACCATCAAGACTCTAACCTTCTCTTATATGAGTATATGGCGAATGGGAGTCTGGGAGAACTCCTCCATGGGAATGGGAATAGATGTTTGCTGGACTGGGATACTCGCTATAAAATTGCTCTTGGAGCAGCAGAGGGTTTGTGCTATCTTCACTGTGACTGCAAGCCTCATATCATTCATCGTGATATAAAATCAAATAACATTTTACTGGATGAAGCACTAGAGGCTCATGTGGGAGATTTTGGCTTGGCAAAGTTGATCGACATACCGTACTCAAAATCCATGTCTGCCGTTGCAGGTTCATATGGCTATATTGCCCCTGAGTATGCCTACACAATGAAAGTCACGGAAAAATGTGACATCTACAGTTTTGGGGTCGTTCTACTGGAATTAGTTACCGGGCGGTCTCCGGTTCAGCCCCTCGACCAAGGAGGGGACCTGGTCACTTGGGTGAGAAGGTCAATTCAGAACACAGTGCCAACATCCATGGTCTTCGACGAACGGTTGGATTTGAACACAAGGAGGATGATCGAGGAGATGTCACTAGTTCTCAAGATTGCCTTGTTTTGTACCAGTACATCCCCACTCAATAGGCCGACCATGAGAGAGGTCATCGCGATGATGATTGATGCTAGGGAGGCCTCATGCAGTTCTTCATCCTCTCCAACATCAGAGACCCCTTTAGATGAAGATGCTGCTTGCAGAGGATGTGAGAAGCCATAG 3315 0.4392 MTTLNIIPSCFITICYFFIFVRSLNQEGNLLLEFKTSLIDNNETLQSWSPSDLTPCRWNGIDCTDYKVTSINLHLFNLSGTLSSFVCKFDRLIVLNVSENFISGPLPKDFAYCANLEVLDLSSNRFHGEIPPHLCRISTLRVLFLSENFLYGRIPEEIGNLMLLEELVIHSNNLTDAIPSSIGMLKKLRIIRAGRNALSGPIPVKISECESLEILGLAQNRLEDPLPREFLRLQNLTTLILWQNLLSGQIPPELGSCSNLELLALNDNAFSGSIPKELGKLSKLKKLYIYTNRLNGTIPSELGNCVSAAEIDLSENQLTGFIPMELNQVPNLRLLHLFENLLQGSIPRELGRLEQLRKLDLSINNLTGTIPLEFQNLTFLEDLQLFDNNLEGTIPPLLGASSNLSVLDMSENNFVGNIPAQLCKFQKLMFLSLGSNFLSGNIPYGLKTCKFLVQLMLGDNQLTGSLPVELSNLRNLSALELYQNRFSGPISSEVGKLKNLERLLLSDNYFVGNIPPEIGELVRLVSFNISSNQLSGSIPHELGNCTELQRLDLSRNQFTGNVPEELGNLVSLELLKLSDNILNGAIPNTLGRLSRLTELQMGGNYLSGRIPVQLGQLSALQIALNISHNALSGGIPDDLGNLQMLESLYLNNNHLDGEIPTSIGGLLSLWVCNLSHNNLVGLLPNTPVFQRMDASNFFGNDGLCRLGSNSCHPSLPPSLATHRSWIEQGSSKEKIVSITAVIIGLISLALTVGVCWILKRRKPVFVAFDNPMKPDVSDSYYFPKEGFTYQDLLEATSYFSESAVIGSGACGTVYKAVMSDGELIAVKKLKSCGEASNVDSSFQAEISTLGKIRHRNIVKLYGFCYHQDSNLLLYEYMANGSLGELLHGNGNRCLLDWDTRYKIALGAAEGLCYLHCDCKPHIIHRDIKSNNILLDEALEAHVGDFGLAKLIDIPYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLDQGGDLVTWVRRSIQNTVPTSMVFDERLDLNTRRMIEEMSLVLKIALFCTSTSPLNRPTMREVIAMMIDAREASCSSSSSPTSETPLDEDAACRGCEKP* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01218 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 401 715 - -
Eupl02g01218 1104 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Eupl02g01218 1104 FunFam Predicted protein 179 274 - -
Eupl02g01218 1104 SUPERFAMILY Protein kinase-like (PK-like) 772 1072 IPR011009 -
Eupl02g01218 1104 ProSiteProfiles Protein kinase domain profile. 799 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01218 1104 FunFam Leucine-rich repeat receptor-like protein kinase 24 178 - -
Eupl02g01218 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 876 - -
Eupl02g01218 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Eupl02g01218 1104 Gene3D Phosphorylase Kinase; domain 1 773 876 - -
Eupl02g01218 1104 SUPERFAMILY L domain-like 45 390 - -
Eupl02g01218 1104 MobiDBLite consensus disorder prediction 1080 1104 - -
Eupl02g01218 1104 SMART serkin_6 799 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01218 1104 Pfam Protein kinase domain 800 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01218 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 877 1089 - -
Eupl02g01218 1104 Gene3D Ribonuclease Inhibitor 446 584 IPR032675 -
Eupl02g01218 1104 Gene3D Transferase(Phosphotransferase) domain 1 877 1094 - -
Eupl02g01218 1104 ProSiteProfiles Leucine-rich repeat profile. 355 376 IPR001611 GO:0005515
Eupl02g01218 1104 Gene3D Ribonuclease Inhibitor 585 712 IPR032675 -
Eupl02g01218 1104 Gene3D Ribonuclease Inhibitor 78 283 IPR032675 -
Eupl02g01218 1104 Gene3D Ribonuclease Inhibitor 20 77 IPR032675 -
Eupl02g01218 1104 Gene3D Ribonuclease Inhibitor 284 445 IPR032675 -
Eupl02g01218 1104 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Eupl02g01218 1104 SMART LRR_typ_2 281 305 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 377 401 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 113 137 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 497 521 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 642 666 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 233 257 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 545 569 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 593 617 IPR003591 -
Eupl02g01218 1104 SMART LRR_typ_2 353 376 IPR003591 -
Eupl02g01218 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 275 377 - -
Eupl02g01218 1104 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 471 1072 - -
Eupl02g01218 1104 Pfam Leucine Rich Repeat 115 135 IPR001611 GO:0005515
Eupl02g01218 1104 Pfam Leucine Rich Repeat 645 666 IPR001611 GO:0005515
Eupl02g01218 1104 SUPERFAMILY RNI-like 366 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01218 Eupl-Chr2 25308570 25316086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01218 43 1084 Receptor kinase-like Gene Family AT1G73080 38.588 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl02g01218 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01218 - - tss:122651864 1722.98