Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01204 ATGGAGGGGGACGAGATTCAGACGCAGGCGTGTAAGCTGTCAAGGATTGGTAACAGTAGAAACGATTCTAACAAGATAGGGAAAAAGGGTGGGGAACAATACCAAGATGAAGACGAAGAAGATGGAGAAAGCAAAGTTGGAGGAGGTGGTGGTGTTGGAAGCGAAAGTAGTCGCCTTCGCGCGTGGCACTCGTCCAGGATTTTTCGAGTTTCTCGAACCTCTGGCGGGAAAGATCGCCACAGCAAGGTTTTAACGGCAAAAGGGCTTAGAGACCGCAGGGTTCGTCTCTCTGTCTCCACGGCTATACAGTTCTACGATCTTCAGGACCGTTTGGGCTACGATCAGCCCAGCAAGGCAGTGGAGTGGCTTATAAAATCTGCCGCCGATGCCATCGCGGAGCTTCCTTCACTCAACACTTCGTTTCCCGACACACCAAAGCAACCAAGCGACGAGAAGAGGCCCAGCGGTTCCGAACCCAGATTCGACCCCGCCGAGGTTGAACTAGAAACCGATCCTTCTTATCAGCAGCAGCAACAGCACATTTCCCTAACAAAATCCACCTGCAGCAGCACTTCTGAGACGAGCAAGGGCTCGGTGTTATCTCTCTCCCGATCCGAAATCCGCGTCAAGGCCAGAGAGCGCGCTAGGGAAAGAGCAGCAAAGGAGAAGGAGAAAGAAAAGCAGGAGGATACCCATGTTGCCCATCAACAGAATGTTAACCCTAATTCCCAGAGCTCTTCTTTTACAGAACTTCTCACTGGTGGTGCTAATAGCAACAGTGCCACTGCATCAGCCCAACATAACCTCGGTTGTCCTAATTTCGTTCTCAAGCCAACCCGGCATTTGCCTTCCACCCCGATGGATTACTTCACCACGGGGCTTTTCGGGCCAGCATCATCAAGAACCCATCACTCTTCTGGATTTTCCGGCCAAACCCACTTCGGAAACCCTCCTCAACCCCACATAATGACGGTGTCACCACCGTTCAATGTCACGGGTGATCATCACCCAGAGATGCAGCAGTTCTCATTCTTGCCAGATCATCTCATCCCGGTCGCTGCAGCTGCGGGTGGGGGTGATTACAATCTCAATTTCACCATCTCTTCCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCACCATCCCCGTTGCCTCACTTTCAGAGGTTTCCTTCTCCTGTAGACGGATCAAACATGCCGTTCTTCATCGGGAATGCAGCAGCTTCTACTGCTGTACCTGCGGAGAATCAGTTCCCAGCTGGGTTTGATAGCCGCCTACAACTCTGTTACGGTGACGGGAGTAGGCATTCAGACCTGAAGGGAAAAGGGAAGAGCTGA 1347 0.5204 MEGDEIQTQACKLSRIGNSRNDSNKIGKKGGEQYQDEDEEDGESKVGGGGGVGSESSRLRAWHSSRIFRVSRTSGGKDRHSKVLTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAIAELPSLNTSFPDTPKQPSDEKRPSGSEPRFDPAEVELETDPSYQQQQQHISLTKSTCSSTSETSKGSVLSLSRSEIRVKARERARERAAKEKEKEKQEDTHVAHQQNVNPNSQSSSFTELLTGGANSNSATASAQHNLGCPNFVLKPTRHLPSTPMDYFTTGLFGPASSRTHHSSGFSGQTHFGNPPQPHIMTVSPPFNVTGDHHPEMQQFSFLPDHLIPVAAAAGGGDYNLNFTISSGLAGFNRGTLQSNSPSPLPHFQRFPSPVDGSNMPFFIGNAAASTAVPAENQFPAGFDSRLQLCYGDGSRHSDLKGKGKS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01204 448 ProSiteProfiles R domain profile. 205 223 IPR017888 -
Eupl02g01204 448 MobiDBLite consensus disorder prediction 1 58 - -
Eupl02g01204 448 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Eupl02g01204 448 MobiDBLite consensus disorder prediction 135 264 - -
Eupl02g01204 448 MobiDBLite consensus disorder prediction 234 264 - -
Eupl02g01204 448 Coils Coil 209 238 - -
Eupl02g01204 448 MobiDBLite consensus disorder prediction 170 202 - -
Eupl02g01204 448 MobiDBLite consensus disorder prediction 146 167 - -
Eupl02g01204 448 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 50 376 IPR005333 GO:0003700
Eupl02g01204 448 Pfam TCP family transcription factor 75 225 IPR017887 -
Eupl02g01204 448 MobiDBLite consensus disorder prediction 206 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01204 Eupl-Chr2 24385153 24397765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01204 58 447 TCP Transcription Factor Family AT4G18390 45.154 7.34e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl02g01204 TCP 2.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01204 - - nnu:104610792 618.616