Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01181 ATGGAGCAAGGCCACATCTGTCAGTGTTTGAATCGGATAGCCACTATCCGTCGAGATTCACTCGTCACAATCTTCGGAAACCGGCGGAAGACCGGTTTGCAATTCGTGGAGAGTGTCCAAAGCCTCGCTCAAGGCTTGTCAGGACTCGGCCTTAGAAGCGGTGACATTGTCGCCATTGCTGCTCTCAACAGTGATTGCTATTTGGAATGGTTGTTGGCTATTGCATTTGTTGGAGGGATAGCAGCTACACTCAATTACCGTTGGAGCTTCGAAGAGGTGAGATCAGCAATGGAAATTGTGAGACCGGTAATGTTGGTGGCTGATGAGAGCTGTGATAACTGGTTCTCTGAGCTTCAATATAATGAACTGCCTTCTTTGAGGTGGCATGTTTTCCTTGGAGATTCTTCTTCCTTCCCCATCAACACATGCAATTTTTCTCTCTTGCCAGTGTTAACTACAGAAACCCTTAAAAGGCCTTATCAAATATCTCCACCATTTGATTATGGCTGGGCACCAGAGGGCATTGCTCTTTTATGCTTCACTTCAGGAACCACTGGAAAGCCAAAGGGAGTTGCAATAAGCCATACAGCTCTGATCATTCAATCGCTTGCAAAAATCGCCATTGTTGGTTACAGTGAGGATGATGTTTATCTCCATACAGCTCCTTTGTGCCACATTGGTGGGATATCCTCAGGCATGGCCATGCTAATGGTAGGAGCTTGCCATGTCTTCATGCCCAAGTTTGAAGCCAAATCAGCTGTCGAAGCCATAGAACAACACCATGTGTCTTCTCTAATCACCGTCCCCACAATGATGGCTGATCTGATTTCCTTCATCAGGAACCATAAAACATGGAAGGGTGGAGGATCTGTGAAAAAGATATTAAACGGAGGTGGAGCGCTCTCAGTTGAACTTACTAGGGATGCTACCAAAATATTCCCTGCTGCTAAGCTTCTTTCAGCTTATGGGATGACGGAGACTTGTTCTTCACTAACCTTCATGACCCTTTATGATGAATCGTCGACACCTGAAAATTCCGGCGATCCCCTTCAGAAGATGGGCCGAGTAAAATCCGACTTAAATCGCCAGGTAGGGGTTTGTGTTGGGAAACCTGCACCACATGTCGGATTAAGGATAAGTGGTGAGGGGGCTTCTTCAATTGGGAGGATTTTAACTAGAGGTCCCCATGTAATGCTCAAGTACTGGAACAAAATTCCGGTGCTGATATCAGATTCTCGAGATCAAGGTTGGCTTGACACAGGTGACATTGGTCGAATTGATGACTTTGGCAACGTTTGGCTCGTTGGACGATCGAAGGATCGAATAAAGACTGGAGGGGAGAACGTTTTCCCGGAAGAGGTAGAGGCCGTACTATCACAACATCCAGGAGTTTCTAGCGTTGTTGTTGTAGGAATTCCAGACAAGCGGCTATCGGAAATGGTGACAGCATGTGTTCAGATAAGAAAGAATTGGCGGTGGATCGATCAGAATTCTGATCATTCGGGCGAAAGAGATGAGCTACAATTATCTAGTGAGATCCTTAAGAAGCATTGCAAACAGAGGAACTTGACCGGGTTCAAAATACCAAAGATTTTTATTTTGTGGAGAAAGCCGTTTCCATTGACGACGACAGGGAAACTGAAAAGAGATGAAATTAGAAGAGAGGTCATCTCTCATGTGCAATTCTTGTTCAGCAACCTTTGA 1704 0.4548 MEQGHICQCLNRIATIRRDSLVTIFGNRRKTGLQFVESVQSLAQGLSGLGLRSGDIVAIAALNSDCYLEWLLAIAFVGGIAATLNYRWSFEEVRSAMEIVRPVMLVADESCDNWFSELQYNELPSLRWHVFLGDSSSFPINTCNFSLLPVLTTETLKRPYQISPPFDYGWAPEGIALLCFTSGTTGKPKGVAISHTALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGISSGMAMLMVGACHVFMPKFEAKSAVEAIEQHHVSSLITVPTMMADLISFIRNHKTWKGGGSVKKILNGGGALSVELTRDATKIFPAAKLLSAYGMTETCSSLTFMTLYDESSTPENSGDPLQKMGRVKSDLNRQVGVCVGKPAPHVGLRISGEGASSIGRILTRGPHVMLKYWNKIPVLISDSRDQGWLDTGDIGRIDDFGNVWLVGRSKDRIKTGGENVFPEEVEAVLSQHPGVSSVVVVGIPDKRLSEMVTACVQIRKNWRWIDQNSDHSGERDELQLSSEILKKHCKQRNLTGFKIPKIFILWRKPFPLTTTGKLKRDEIRREVISHVQFLFSNL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01181 567 Pfam AMP-binding enzyme 17 444 IPR000873 -
Eupl02g01181 567 Gene3D - 441 562 IPR045851 -
Eupl02g01181 567 CDD AFD_class_I 175 548 - -
Eupl02g01181 567 ProSitePatterns Putative AMP-binding domain signature. 178 189 IPR020845 -
Eupl02g01181 567 Gene3D - 1 440 IPR042099 -
Eupl02g01181 567 Pfam AMP-binding enzyme C-terminal domain 453 546 IPR025110 -
Eupl02g01181 567 SUPERFAMILY Acetyl-CoA synthetase-like 6 558 - -
Eupl02g01181 567 PANTHER ACYL-COA SYNTHETASE 6 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01181 Eupl-Chr2 21834100 21847232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01181 40 471 Monolignol Biosynthesis Gene Families AT3G21240 29.841 6.25e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01181 K14760 - ming:122079533 771.155