Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01165 ATGGAGTCTTGCAACTGCATTGAGCCCCAATGGCCAGCTGACGAGCTATTGATGAAGTACCAGTACATTTCAGACTTCTTTATTGCACTTGCCTATTTTTCCATCCCTCTCGAGCTAATCTACTTTGTGAAGAAATCTGCAGTTTTTCCATATAGATGGGTGCTTGTACAGTTTGGTGCTTTCATCGTTCTTTGTGGAGCAACACACCTTATTAACTTATGGACTTTCGGCATGCATTCGAGAACTGTGGCAGTTGTAATGACCACAGCAAAGGTTTTGACTGCTGTCGTGTCATGTGCGACAGCCCTTCTGCTTGTGCACATAATTCCTGATTTGTTGAGTGTGAAAACCAGGGAGTTATTTTTAAAAAATAAGGCTGCAGCGCTTGATCGAGAGATGGGCCTGATTCGTACCCAGGAAGAGACAGGCCGGCATGTTAGAATGCTCACTCATGAGATTAGAAGCACCCTTGATAGACATACGATATTGAAGACCACTCTTGTTGAGCTGGGTAGGACTTTGGCATTAGAGGAGTGTGCATTATGGATGCCAACACGTACTGGTTTGGAGCTTCAACTCTCCTACACTCTACGTCACCAAAACCCTGTTGGATTTACTGTACCTATTCAGCTTCCTGTGATCAATCAAGTTTTTAGTAGCAACCGTGCGGTGAAAATATCTCCAAATTGCCCAGTGGCAAGACTTCGACCTCTTGCAGGAAAATATATGCCTGGGGAGGTTGTTGCTGTGCGCGTCCCTCTTTTACATCTTTCAAATTTCCAAATTAATGATTGGCCAGAGCTTTCCACAAAACGTTATGCATTGATGGTTTTGATGCTCCCCTCAGACAGTGCGAGGCAATGGCATGTCCATGAATTGGAGCTTGTTGAAGTGGTCGCCGATCAGGTGGCAGTTGCTCTTTCACATGCTGCAATCTTAGAAGAATCTATGAGAGCAAGGGATCTGCTTATGGAACAAAATGTTGCACTGGATCTGGCGAGTAGAGAAGCAGAAACAGCTATTCGTGCACGAAATGATTTCTTGGCAGTTATGAACCATGAGATGAGAACCCCTATGCACGCCATTATTGCACTCTCTTCCTTGCTGCAGGAAACTGAACTGACACCTGAACAGCGCCTGATGGTGGAAACAATCTTAAAGAGCAGTAATCTCTTAGCAACACTCATTAATGATGTGTTAGATCTTTCTAGGCTTGAAGATGGAAGCCTTGAACTTGACCTTGGGACTTTTAACCTTCATGCGGTATTCAGAGAGGTTATTAACTTGATCAAGCCCATTGCATCTGTCAAAAAGTTGTTAGTATCATTAAGTTTGGCTGCAGATTTGCCTGAGTATGCTGTTGGTGATGAAAAACGCCTCATGCAAACCATTTTAAATGTTGCCGGTAATGCTGTGAAGTTCACAAAAGAGGGGAGCATCTCAATCACTGCTTGTATTGGAAAATCAGAATCTTTAAGAGATGCTCGGCTTCCTGAGTTTTTTCCAGTGCCAAGTAATAATCGCTTCTATTTGCGAGTACAGGTAAAGGATTCAGGGTCGGGAGTTAGCCCCCAAGATATTCCCAAGTTGTTTAACAAATTCACACAAATTAATTCTCTATCAAGTAGAAATTCTGGTGGCACAGGACTTGGGCTTGCAATTTGTAAGAGGTTCGTAAGTCTCATGGAGGGGCATATTTGGATTGAAAGTGAAGGTCTCAGCAAAGGTTCTACTGCTACATTCATTGTAAAACTTGGAATTGCGGAGCGCTTAAATGAGTCTGAGCACCATTTTGTACCTCAATTGCAAGCTAATCATGGCCGGGCAAATTTTCCAGGACTCAAAGTTCTCCTTATGGACGACAATGGGGTTAGCAGGATGGTGACAAAGGGACTTCTCGTGCATCTGGGATGTGATGTAACAATGGTTAGCTTGGGCGAGGAATGTCTGCGAATTGTTTCTCAGGAACATAAGGTGGTATTCATGGATGTATGTGTGCCCGGGATGGATGGGTATGAATTGGCAATCCAAATACATGAAAAATTCGCGACTCATCATGAGAAGCCGCTGCTCATAGCACTTACAGGGAATACAGATAGAGTGACGAAGGAGAGCTTCTTGAGAGTTGGTATGGATAGAGTGATACTGAAACCAATTTCGCTTGAGAAGATGAGGGATGTTCTGTCAGAGCTGTTTGAGGGTGGGGTTCTGTGA 2214 0.4381 MESCNCIEPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFGMHSRTVAVVMTTAKVLTAVVSCATALLLVHIIPDLLSVKTRELFLKNKAAALDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRHQNPVGFTVPIQLPVINQVFSSNRAVKISPNCPVARLRPLAGKYMPGEVVAVRVPLLHLSNFQINDWPELSTKRYALMVLMLPSDSARQWHVHELELVEVVADQVAVALSHAAILEESMRARDLLMEQNVALDLASREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLELDLGTFNLHAVFREVINLIKPIASVKKLLVSLSLAADLPEYAVGDEKRLMQTILNVAGNAVKFTKEGSISITACIGKSESLRDARLPEFFPVPSNNRFYLRVQVKDSGSGVSPQDIPKLFNKFTQINSLSSRNSGGTGLGLAICKRFVSLMEGHIWIESEGLSKGSTATFIVKLGIAERLNESEHHFVPQLQANHGRANFPGLKVLLMDDNGVSRMVTKGLLVHLGCDVTMVSLGEECLRIVSQEHKVVFMDVCVPGMDGYELAIQIHEKFATHHEKPLLIALTGNTDRVTKESFLRVGMDRVILKPISLEKMRDVLSELFEGGVL* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01165 737 SMART HKATPase_4 455 589 IPR003594 -
Eupl02g01165 737 SUPERFAMILY CheY-like 610 732 IPR011006 -
Eupl02g01165 737 Gene3D - 408 592 IPR036890 -
Eupl02g01165 737 FunFam Ethylene receptor 608 737 - -
Eupl02g01165 737 ProSiteProfiles Response regulatory domain profile. 615 732 IPR001789 GO:0000160
Eupl02g01165 737 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 455 585 IPR003594 -
Eupl02g01165 737 Gene3D - 309 407 - -
Eupl02g01165 737 CDD HisKA 341 404 IPR003661 GO:0000155|GO:0007165
Eupl02g01165 737 SMART HisKA_10 343 408 IPR003661 GO:0000155|GO:0007165
Eupl02g01165 737 Pfam Response regulator receiver domain 616 727 IPR001789 GO:0000160
Eupl02g01165 737 Gene3D - 136 308 IPR029016 -
Eupl02g01165 737 PRINTS Bacterial sensor protein C-terminal signature 511 525 IPR004358 GO:0016310|GO:0016772
Eupl02g01165 737 PRINTS Bacterial sensor protein C-terminal signature 529 539 IPR004358 GO:0016310|GO:0016772
Eupl02g01165 737 PRINTS Bacterial sensor protein C-terminal signature 546 564 IPR004358 GO:0016310|GO:0016772
Eupl02g01165 737 Gene3D - 608 734 - -
Eupl02g01165 737 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 733 - -
Eupl02g01165 737 SMART REC_2 614 728 IPR001789 GO:0000160
Eupl02g01165 737 Pfam GAF domain 158 307 IPR003018 GO:0005515
Eupl02g01165 737 ProSiteProfiles Histidine kinase domain profile. 350 589 IPR005467 -
Eupl02g01165 737 FunFam Ethylene response sensor 136 308 - -
Eupl02g01165 737 SMART gaf_1 158 317 IPR003018 GO:0005515
Eupl02g01165 737 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 397 585 IPR036890 -
Eupl02g01165 737 Pfam His Kinase A (phospho-acceptor) domain 344 408 IPR003661 GO:0000155|GO:0007165
Eupl02g01165 737 SUPERFAMILY GAF domain-like 161 310 - -
Eupl02g01165 737 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 329 409 IPR036097 GO:0000155|GO:0007165
Eupl02g01165 737 FunFam Ethylene receptor 1 408 590 - -
Eupl02g01165 737 CDD HATPase_EvgS-ArcB-TorS-like 460 585 - -
Eupl02g01165 737 CDD REC_ETR-like 614 728 - -
Eupl02g01165 737 FunFam Ethylene receptor 1 310 406 - -
Eupl02g01165 737 PIRSF Ethylen_sen_hybr_HK 1 736 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01165 Eupl-Chr2 20546091 20562613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01165 1 737 Miscellaneous Gene Families AT1G66340 81.978 0.0 1249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl02g01165 GAF 1.2e-14 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01165 K14509 - cit:102578063 1251.88