Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01161 ATGGCGGAGTCCAGTACAACCCCAGGCACCCCCGAAAGCGCGCAATCTAGTCGGGATAATGACCGATTCCTCCCCATCGCCAACATCGCCCGCATCATGAAGAAGGTCATTCCCTCCAACGGAAAGATATCTAAGGACGCCAAGGACTCCGTCCAGATGTGCCTCTCCGAGTTCATCGGCTTGGTCACCAGCGAGGCCAGCGAGAAGTGTCGCCAAGAGCGCAGAAAGACTATCAGTGGCGAAGATTTGTTGTGGTCCTTGCGAACGGTGGGTTTTGGAAGATACATCGTGCCGCTTAAGCTGTATTTGCAGCTCTACAGAGAGGGTGACGCTAAGGTTTCACAATCCACGGATCAAGCTGGTTGGAATAATAGTAACCCAGATTATGGTGATTTGGGTGTTCTGGGTGACGCTAAGGTTTTACAATCCACGGATCAAGCTGGTTGGAATAATAGTTACCCATATTATGGTGATTTGGGTGTTCTGGGTGACGCTAAGGTTTCACAATCCACGGATCAAACTGGTTGGAATAATAGTAACCCAGATTATGGTGAATTGGGTGTTCTGGGTGACGCTAAGTTTTCACAATCCACGGATCAAGCTGGTTGGAATAATAGTAACCCATATTATGGTGATTTGGGTGTTCTGGGTGACGATAAGTTTTCACAATCCACGGATCAAGCTGGTTGGAATAATAGTAACCCATATTATGGTGATTTGGGTGTTCTGGGTGACGCTAAGGTTTTACAATCCACGGATCAAGCTGGTTGGAATAATAGTAACCCAGATTATGGTGATTTGGGTGTTCTGGGTGACGCTAAGTTTTCACAATCCACGGATCAAGCTGGTTGGAATAATAGTAACCCATATTATGGTGATTTGGGTGTTCTGGGTGACGCTAAGGTTTCACAATCCACGGATCAAGCTGGTTGGAATAATAGTAACCCAGATTATGGTGATTTGGGTGTTCTGGTTGACCAAGGATCCTTTGATTCAGGAATGAACTACATTTATCCCAGGTTGGTGCTTGAAAGTTTTCAAGCAGCTGCAATCGGGTTCTTGTTTGTTGTTCTGGCAGAGATTCGTGTTTCAGGGTATGTGGTCGATGTGAAGAACAACTCTAGAGGAAACTTTATGCGGCTCATGGAGTTTTCTGATAGCAGGCGCAATGTGGCTATGTTCTTCTCAGAAGGTTATTGTAGAACAAGTTGGAGTTTGATCGAGAACATGATTAGAAGGTTTATGGGGAGCAAGCCTCTTTGGACTGCCCCTTTTTTGAATACTAACCCTGCACTTCCAGTGCCTCGGAGGGTGAAAGGGGTTATCAACTTTGAGACTGGGGTAGAATCGGGTATTTGGTGTCGCCCTACTCTTGGCTTATTTCGAGCTTTATTTCAGGATCTATCTATTCCTCTTCCACCTAAGGAACAACGGAATGGTGCTTCGAAATGCTGTCTTGGCATCGCTAAAGGGTCAAGGATCACCATGGAAGGCAAATCCTTTAACCCAGTATCATCATTGACTTGGCAGACCATGGGGGGAAGAGTGCTATTAACCATTCCAGCCAACTCACATCGACGTTATTCCGAGGACCCACCAGGGGCAGCTCAACCCATCATCTTATCTTTGGGCATCGCTTTAGGACTATCTTTTCAGAGACATGGTTCGGAGGCAGTGAAACTACTGGCAGAGGTAGAATCGCTGGAGAATGTCTGTTCCAAGGACATTCTGGAGCTGAATGTCTCAGACAATTCAGTACCTCTAGGTGACGAGCTAGCTTTGGTTTCCCCAACTCCCAATCCTTGGTCTCTTAAGAACAGGAGAGAATTCACCAGATTGGGCTTGAAGCAGAATGGGGTGGAGTCTCTATTTGGGTCGCGAAGGCAAAGAAGGAAGAAAGCTGGGCTAGCCTCCTCTGCATAG 1923 0.4675 MAESSTTPGTPESAQSSRDNDRFLPIANIARIMKKVIPSNGKISKDAKDSVQMCLSEFIGLVTSEASEKCRQERRKTISGEDLLWSLRTVGFGRYIVPLKLYLQLYREGDAKVSQSTDQAGWNNSNPDYGDLGVLGDAKVLQSTDQAGWNNSYPYYGDLGVLGDAKVSQSTDQTGWNNSNPDYGELGVLGDAKFSQSTDQAGWNNSNPYYGDLGVLGDDKFSQSTDQAGWNNSNPYYGDLGVLGDAKVLQSTDQAGWNNSNPDYGDLGVLGDAKFSQSTDQAGWNNSNPYYGDLGVLGDAKVSQSTDQAGWNNSNPDYGDLGVLVDQGSFDSGMNYIYPRLVLESFQAAAIGFLFVVLAEIRVSGYVVDVKNNSRGNFMRLMEFSDSRRNVAMFFSEGYCRTSWSLIENMIRRFMGSKPLWTAPFLNTNPALPVPRRVKGVINFETGVESGIWCRPTLGLFRALFQDLSIPLPPKEQRNGASKCCLGIAKGSRITMEGKSFNPVSSLTWQTMGGRVLLTIPANSHRRYSEDPPGAAQPIILSLGIALGLSFQRHGSEAVKLLAEVESLENVCSKDILELNVSDNSVPLGDELALVSPTPNPWSLKNRREFTRLGLKQNGVESLFGSRRQRRKKAGLASSA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01161 640 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Eupl02g01161 640 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 149 IPR027113 GO:0001228|GO:0006355|GO:0016602
Eupl02g01161 640 SUPERFAMILY Histone-fold 20 122 IPR009072 GO:0046982
Eupl02g01161 640 Gene3D Histone, subunit A 11 128 IPR009072 GO:0046982
Eupl02g01161 640 MobiDBLite consensus disorder prediction 1 20 - -
Eupl02g01161 640 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Eupl02g01161 640 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Eupl02g01161 640 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01161 Eupl-Chr2 20424449 20438370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01161 7 108 CCAAT-HAP3 Transcription Factor Family AT2G38880 60.748 1.13e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Eupl02g01161 CBFD_NFYB_HMF 3.4e-23 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01161 K08065 - nnu:104613487 164.466