LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl02g01136	ATGTCATTTTCTGGTGCAATATCCTTCTTACAACAGCTGTGTAACGACGAGTCCCAAATGGAAAGCGGTAGCCACGGCTTCATCTCCAGTGACCTCTTGCCATCCCTTGGAGCCAGCATCAACCCGGCAACCAAGCTCAGAAGATGCATCATCTCTCCTTTCAATCCCCGTTATAGGGCTTGGGAGATGTTTCTGATTGTTCTGGTCATTTACTCAGCCTGGATCTGCCCATTCGAGTTTGCATTTTTGAGTTACAAGCAAGACGTGCTGTTCGTCATTGACAACATTGTCAATGGCTTCTTCGCCATTGATATTGTTCTCACCTTCTTCGTCGCATTTCTCGACCGTCGATCTTATCTTCTGATTGATGAGCCCAAGAAAATTGCAACCAGGTACATATCGACCTGGTTCGTTTTCGATGTCTGTTCAACAGCACCATTTCAACCTCTCAGTCTCCTCTTTACGGATCACAGCAGCGGCCTCGGTTTTAAAGCACTCAATATGCTCCGACTGTGGCGTCTCCGACGGGTCAGCTCCCTGTTCGCAAGACTTGAGAAGGACATCCGGTTCAACTATTTCTGGACTCGGTGCACAAAGCTTGTCTCAGTAACCCTGTTTACAGTTCATTGTGCTGGATGTTTTAACTATCTGATTGCAGACAGATACCCGGATCCAAAGAGGACCTGGATTGGTGCGGTGATCCCAAATTTCAAAGAAGAGAGTCTTTGGAACAGATACATAACTGCAATGTACTGGTCCATCACAACACTAACAACGACTGGTTATGGGGACTTGCATGCTGAGAACCCAATAGAGATGTTGTTTGATATCTTCTACATGCTATTCAACTTGGGATTGACAGCTTACCTCATCGGGAACATGACAAACCTCGTCGTCCATGGGACCAGCCGCACCAGAAATTTTAGGGAAACAGTCCGAGCTGCTTCTGAATTCGCAGCCCGAAATCAGTTGCCCGTGCCCATACAGAATCAAATGTTATCACACTTATGTCTCAAGTTCAAAACAGAAGGATTGAAACAGCAAGAAACCTTGAATGGTCTGCCGAAGGCCATTCGTTCAAGCGTAGCTCGCTATCTCTTCTTCCCGGTCGTTCAAAATGCCCATCTTTTTCAAGGAGTTTCCAATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAGGCTGAGTACTTCCCACCCAAGGAAGATGTGATTTTGCGGAATGAAGCTCCAACAGATCTTTATATACTGGTTTCAGGAGCAGTGGAATTGATAGCATATACTAATGGATGTGATCAAGTCTACGGAAGAGCAGCTGCAGGGGACATATTTGGGGAAATTGGGGTCTTATGTTACAGGCCACAGCCATTCAATGTTCGGACCACTGAGCTTTCTCAAATCCTACGGCTGAACAGAACTTCACTCATGAACATTATTCAGGCAAATATAGAAGATGGAAATATTATCATGAACAATCTTTTCCAGAAACTGAAGGGCCTCGAGAGCTTAGGTTTTGGAGACCCACTTAGAGATCAATGGTTGATCATCGAAGAATGGCTTGATGGAGGACCACTAGGAAGAAGCTGGTCACATGTAGGATGTCAAGACTATTGTCCAACTAGAGATCCGTCAATTAACGAAACAAGGGACTTGGGTCTTCTGGTGCACCAATCTACAGAGAAGGAAGAAACAGACACAGTCTATGATCTTATCCAACGTGGAGCTGACATAAATTCAACCAATGCAGATGGACAAACACCGCTTCATATTGCTGTCCACAAGGGACATATCGAAATGGTTAAGATTCTGCTTGAAGGAGGAGCAAATGTAAACAAATCAGATGCGATGGGGCGGACACCAAAAGCTCGGGCAGAGCAACAAGGACAGAAAAGCATCTATGATCTCTTACTATGTTATGAAGACAGGAAAAGAAATGTAGGGGATCATAAAATAGAATTTATGGAGACAGAAACGGTCAACCACACCAGGAACAATCAAATCAAAGACGGGAGAAAAGTAAACAACAATTTTGCTAACTCTCATTTTTCCAAGATAGCAGCAAAATACAGTTCAGGCAGCTGTAGCTGTCCCAGTGATTGTGCAGTCATGAAATTGACCAACAGGAGAGTCACACTACACATGCATTTTCAAACGGAAAATATATCACAAAATCAGCTTGGAAAGTTAATAATCCTACCTGATTCATTAGAAGAACTACTCAGAATCGCTGGTCAAAAGTTTGCAGGCTACCATCCTACAAAAGTCTTCAACGAAGAGAATGCAGAAATAGATGATATAAGCGTTGTTCGAGATGGGGATCATCTGTTTCTCCTTCAATGA	2337	0.439	MSFSGAISFLQQLCNDESQMESGSHGFISSDLLPSLGASINPATKLRRCIISPFNPRYRAWEMFLIVLVIYSAWICPFEFAFLSYKQDVLFVIDNIVNGFFAIDIVLTFFVAFLDRRSYLLIDEPKKIATRYISTWFVFDVCSTAPFQPLSLLFTDHSSGLGFKALNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLVSVTLFTVHCAGCFNYLIADRYPDPKRTWIGAVIPNFKEESLWNRYITAMYWSITTLTTTGYGDLHAENPIEMLFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRNFRETVRAASEFAARNQLPVPIQNQMLSHLCLKFKTEGLKQQETLNGLPKAIRSSVARYLFFPVVQNAHLFQGVSNDFLFQLVSEMEAEYFPPKEDVILRNEAPTDLYILVSGAVELIAYTNGCDQVYGRAAAGDIFGEIGVLCYRPQPFNVRTTELSQILRLNRTSLMNIIQANIEDGNIIMNNLFQKLKGLESLGFGDPLRDQWLIIEEWLDGGPLGRSWSHVGCQDYCPTRDPSINETRDLGLLVHQSTEKEETDTVYDLIQRGADINSTNADGQTPLHIAVHKGHIEMVKILLEGGANVNKSDAMGRTPKARAEQQGQKSIYDLLLCYEDRKRNVGDHKIEFMETETVNHTRNNQIKDGRKVNNNFANSHFSKIAAKYSSGSCSCPSDCAVMKLTNRRVTLHMHFQTENISQNQLGKLIILPDSLEELLRIAGQKFAGYHPTKVFNEENAEIDDISVVRDGDHLFLLQ*	779

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl02g01136	778	ProSiteProfiles	KHA domain profile.	708	778	IPR021789	-
	Eupl02g01136	778	ProSiteProfiles	Ankyrin repeat region circular profile.	582	613	-	-
	Eupl02g01136	778	ProSiteProfiles	cAMP/cGMP binding motif profile.	376	495	IPR000595	-
	Eupl02g01136	778	SMART	ANK_2a	582	611	IPR002110	GO:0005515
	Eupl02g01136	778	SMART	ANK_2a	549	578	IPR002110	GO:0005515
	Eupl02g01136	778	Pfam	Ion transport protein	59	305	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Eupl02g01136	778	SUPERFAMILY	cAMP-binding domain-like	303	496	IPR018490	-
	Eupl02g01136	778	FunFam	Potassium channel KAT3	60	300	-	-
	Eupl02g01136	778	PANTHER	POTASSIUM CHANNEL AKT1	24	497	IPR045319	GO:0005249\|GO:0006813
	Eupl02g01136	778	Gene3D	Jelly Rolls	340	499	IPR014710	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl02g01136	Eupl-Chr2	19602979	19607267	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl02g01136	1	776	Ion Channels	AT5G46240	57.529	0.0	877

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl02g01136	K21867		-	ming:122086481	1164.44

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