Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01124 ATGGCTATCAGGGGCGTCGATTTCAAGTGGTATGATGGGTTCTTCTTGTCGATGCTCGCGACGAGCGTAATCATTGTTTCGATGAATTGGAAGCGAAACCATCTGTGTACACACCCTTTGCATATATGGATTGTGGTTGACTACACAACTATCTTCGTTTTTCGGCTGCTGATGTTGGTAGACAACGGCCTTGCGGCAGGAATGGGTTTGGATCTAGGCTGGCAGCAAAGATATGCTGGCTTCTGCGGAAGAATTGCAGTTCTTTCAATTCTTTCTCTGCTACTTTACCCTTTTTTATGGGCTTGGACCATAATCGGTTCACTATGGTTCACAAGTGCTAGAAGCTGTGTAAGTTTTTGA 360 0.45 MAIRGVDFKWYDGFFLSMLATSVIIVSMNWKRNHLCTHPLHIWIVVDYTTIFVFRLLMLVDNGLAAGMGLDLGWQQRYAGFCGRIAVLSILSLLLYPFLWAWTIIGSLWFTSARSCVSF* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01124 119 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 117 IPR044793 GO:0004842|GO:0010182
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01124 Eupl-Chr2 18752204 18754135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01124 58 118 C3H Transcription Factor Family AT3G47990 68.852 9.14e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01124 K16284 - ming:122075481 222.246