Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01116 ATGAGCGAAGATGGGAAGAGCAGAGGGATCGTTGGCGATCAGCAGCAGCAGCAGCATCATTACGGGACGTTCCAAGGTGTTCCGAACTACTCTGAGCCATCGATCGGATTCCCTCAACCGGTTCCACCACCAGGCGCCACTGAACCTTCAGCTCCTCCTCCTCCTCCACCTCCTTACTACCCTTATGGCTACCAAGCCGTTCCAGGTTATGCAGTTGCTGAAGGAAGACCTGTAAGAGAGCGTCGTCTTCCTTGTTGTGGTATTGGCTGTGGTTGGTTTCTGTTTATAATTGGTTTCTTTCTTGCTGCCATTCCATGGTATGTTGGAGTTGTGATTCTACTTTGTTCCAGAATTGATTATAGAGAGAAACCAGGGTTTATTGCATGTACAATTGCTGCTGTTCTTGCGGCAATTGCTGTTGTTCTTGGTGTAACAAAGGGGGCTGATGACTGGTGA 456 0.489 MSEDGKSRGIVGDQQQQQHHYGTFQGVPNYSEPSIGFPQPVPPPGATEPSAPPPPPPPYYPYGYQAVPGYAVAEGRPVRERRLPCCGIGCGWFLFIIGFFLAAIPWYVGVVILLCSRIDYREKPGFIACTIAAVLAAIAVVLGVTKGADDW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01116 151 MobiDBLite consensus disorder prediction 1 57 - -
Eupl02g01116 151 MobiDBLite consensus disorder prediction 35 57 - -
Eupl02g01116 151 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 151 IPR044804 -
Eupl02g01116 151 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01116 Eupl-Chr2 18305252 18321588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01116 14 151 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 35.294 9.71e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01116 - - mof:131144787 171.785