Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01096 ATGTTCCGTGCCGGTGCTCCAATCTCCTTGCAGGTAATTTACAACAGGGAAACTGATCAGAGTCGTGGGTTTGGGTTTGTCACTATGAGTACTGTTGAAGAAGTTGAGAAAGCTGTGGAGATGCTTAACCGTTATGACGTAAATGGCAGGCTTTTGACAGTAAACAAGGCTGCTCCAAGAGGGTCACAACTAGAGCGCCCCCCTCGAGTTTTTGAGTCTTCTTTCAGAATCTACATGGGGAATCTGCCATGGCAAGTGGATGATGCTAGCTTAGAGCAGGTGTTCAGTTAA 291 0.4674 MFRAGAPISLQVIYNRETDQSRGFGFVTMSTVEEVEKAVEMLNRYDVNGRLLTVNKAAPRGSQLERPPRVFESSFRIYMGNLPWQVDDASLEQVFS* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01096 96 SUPERFAMILY RNA-binding domain, RBD 5 96 IPR035979 GO:0003676
Eupl02g01096 96 PANTHER OS02G0815200 PROTEIN 4 96 - -
Eupl02g01096 96 Gene3D - 2 69 IPR012677 -
Eupl02g01096 96 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 59 IPR000504 GO:0003723
Eupl02g01096 96 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 52 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01096 Eupl-Chr2 17621063 17624024 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01096 8 96 Eukaryotic Initiation Factors Gene Family AT1G22760 30.303 6.48e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01096 - - msin:131239823 157.532