LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl02g01083	ATGAGCAGTTCACAGACGAGCGGGGCAATGGCGTTGGACGAATCACTCAGTTTTGATGAAATCTCCAAGTTATTCTCTTTGCCCATCGCAGAGGCCGCCAACATTCTCGGTGTTTGTAGTAGTGTTTTAAAGAAAATATGCCGTGACAATGGTGTTGTGAGGTGGCCATATCGCAAGTTTCTAGCTGGAAAGAGTGTTGAAGAAATTCAGAAGGATGCTGCCAGAGAAAGGAAGAAAGAGCTTACTGCTGCCAGACAAAGAAATGATAGTTCAGCAAGTTCAGTTGTATCATCAACCGGTGCTCAATTTCAAAACAAGATGTCAAGCTCCACGAATACCACACAAGCTAATATTTTGCAGCAGCAAGGAAATAGGTTCTTTCAAAATGGGTGGCCCAACCATATGCTTCAATCTGGCCTCACAAAAAGCATTCCGGCGCACTTGGATGAATTTAAGCAGGGATTCCCGTCAAATGGCTTATCAACTGCCTCCATTAGATGGTGGGGAAGCAGCAGTCCGGATGGTTCTGAGGATGAGATCTTTGAAGAGGAACCAATAACCAACCAAGTGGGCAAACAACAATCTGGGGAATTAGCTGATGATGAGGTTGAGTTTGTAGAGGAAGAGAAACCTGAGAGACGAACAGATAAGGGTGACATTGGTCCCCAAGGGACAGCATTGCTGTCATCTGTGAGAAAAAGCGCTGCAGCAGAAGGACGAGAAGCACTTAAGCTCGGTGTCTACAGGGGCTATGGGTCGTTCAAACTCGGCAGGAGAGAGAGGGTTTTGCTTCATGGGGTTTTCAAATCTTCCTTGCCAAGTCAGTGGAGAGTCGACTGTTCTTGA	846	0.4622	MSSSQTSGAMALDESLSFDEISKLFSLPIAEAANILGVCSSVLKKICRDNGVVRWPYRKFLAGKSVEEIQKDAARERKKELTAARQRNDSSASSVVSSTGAQFQNKMSSSTNTTQANILQQQGNRFFQNGWPNHMLQSGLTKSIPAHLDEFKQGFPSNGLSTASIRWWGSSSPDGSEDEIFEEEPITNQVGKQQSGELADDEVEFVEEEKPERRTDKGDIGPQGTALLSSVRKSAAAEGREALKLGVYRGYGSFKLGRRERVLLHGVFKSSLPSQWRVDCS*	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl02g01083	281	ProSiteProfiles	RWP-RK domain profile.	1	83	IPR003035	-
	Eupl02g01083	281	MobiDBLite	consensus disorder prediction	86	112	-	-
	Eupl02g01083	281	PANTHER	-	120	277	-	-
	Eupl02g01083	281	MobiDBLite	consensus disorder prediction	82	112	-	-
	Eupl02g01083	281	Pfam	RWP-RK domain	16	60	IPR003035	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl02g01083	16	121	AtRKD Transcription Factor Family	AT4G35590	36.792	6.79e-10	57.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	RWP-RK	Eupl02g01083		RWP-RK	4.1e-19	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl02g01083	-		-	nnu:104585973	319.701