Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01075 ATGTCATCTGGGAGTTCTCTGAATGCCAAATTATCAGAGAAATCAATTTTTGATCTGAAACTATGGGTTTTGATTGGTATCTGTGTTGGAGCATTTATCATGTTGATTTTGATTATCTTATCAATATGGGTCACGTTTCGGAAGAAACCGAGGAGGACACTGGACAAGTTCTCCCTTTCCCAAATACCCAGTGTCTCAAAGGAAATCAAAGTCGACAGGGTTGGGACTCACAATTTCCCTGATCATCAGGACGATGTTCTTGTCACGGTCCAGGATAAATCAAGTGACAAGAACTCAGAGAAGATGTTAGTTCATTTAGGTAGGAGCAAGTCGAGCGAGGCAGATAACATCAGCCAGTGCAGCTCGATTTATCACCATGAGAGAGTCTATAGCTCGCAGTCAGGGGAAGAAGGAAGCTCAGGGACTGTTCGCAAGCAGTCCACTTTGTCATATGGACTTGTATCAGCTTCTCCTTTAATTGGCTTGCCTGAAGTCTCGCACCTTGGGTGGGGTCACTGGTTTACTCTTAGAGATCTTGATTTTGCGACAAACCATTTCTCGACAGAGAATGTGCTAGGGGAGGGTGGATATGGGGTTGTTTATAAGGGCCGTCTGATCAATGGAACTGAGGTAGCAGTGAAGAAACTCCTCAACAATCTGGGACAGGCGGAGAAGGAATTTAGAGTTGAAGTGGAAGCCATAGGCCATGTCCGACATAAGAATCTGGTTCGGCTCTTGGGTTATTGTGTAGAAGGAACTCACAGGATGCTGGTGTATGAGTATGTTAATAATGGCAACTTAGAGCAGTGGCTTCATGGAGCTATGCGCCAACATGGCTCCCTTAGTTGGGCGGTACGCATGAAGATTATCCTTGGCACCGCTAAGGCACTGGCTTATTTGCATGAAGCAATAGAACCTAAAGTCGTTCACCGAGACATAAAATCAAGCAATATCTTGATTGATGATGAGTTTAATGCCAAGATCTCTGATTTCGGATTGGCCAAGCTCTTGGGTTCTGGAAAAAGTCACATTACAACCAGAGTAATGGGGACATTTGGGTATGTGGCTCCTGAATATGCAAATACTGGTTTGTTAAACGAGAAGAGTGACATTTACAGTTTTGGAGTCCTCTTGCTAGAAGCAGTAACCGGCAGGGATCCTGTTGACTATGGTCGACCTACGAATGAGGTTAATCTTGTTGAGTGGCTTAAAGTGATGGTAGGGACTAGGAGGGCAGAGGAAGTTGTGGACCCAAGCCTTGACGTTAGACCCGCAACGCGGGCTCTTAAACGTGCCCTCTTGATTGCACTGAGATGTGTTGATCCTGACTCGGACAAAAGACCAAAAATGGGTCAAGTCGTTCGAATGCTCGAAGCTGACGACTTCCCATTTCGTGAGGATCGGAGGAACAGAAAGAGTCGTACAGTCAGCATGGAAATTGAATCCATGAAGGAGAATTCTGGTTCCATTGACATGGAAGACAAGGTAGGGACATCAGAAAGCCATACATCCGAGAGATCGCACGGCTAA 1530 0.4549 MSSGSSLNAKLSEKSIFDLKLWVLIGICVGAFIMLILIILSIWVTFRKKPRRTLDKFSLSQIPSVSKEIKVDRVGTHNFPDHQDDVLVTVQDKSSDKNSEKMLVHLGRSKSSEADNISQCSSIYHHERVYSSQSGEEGSSGTVRKQSTLSYGLVSASPLIGLPEVSHLGWGHWFTLRDLDFATNHFSTENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTHRMLVYEYVNNGNLEQWLHGAMRQHGSLSWAVRMKIILGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKISDFGLAKLLGSGKSHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYGRPTNEVNLVEWLKVMVGTRRAEEVVDPSLDVRPATRALKRALLIALRCVDPDSDKRPKMGQVVRMLEADDFPFREDRRNRKSRTVSMEIESMKENSGSIDMEDKVGTSESHTSERSHG* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01075 509 PIRSF TyrPK_CSF1-R 2 54 - -
Eupl02g01075 509 PIRSF TyrPK_CSF1-R 291 509 - -
Eupl02g01075 509 PIRSF TyrPK_CSF1-R 180 292 - -
Eupl02g01075 509 Gene3D Phosphorylase Kinase; domain 1 167 261 - -
Eupl02g01075 509 MobiDBLite consensus disorder prediction 486 509 - -
Eupl02g01075 509 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
Eupl02g01075 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 215 IPR017441 GO:0005524
Eupl02g01075 509 Pfam Protein kinase domain 187 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01075 509 MobiDBLite consensus disorder prediction 465 479 - -
Eupl02g01075 509 SMART serkin_6 186 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01075 509 Gene3D Transferase(Phosphotransferase) domain 1 262 475 - -
Eupl02g01075 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Eupl02g01075 509 SUPERFAMILY Protein kinase-like (PK-like) 170 463 IPR011009 -
Eupl02g01075 509 Coils Coil 206 226 - -
Eupl02g01075 509 MobiDBLite consensus disorder prediction 465 509 - -
Eupl02g01075 509 FunFam Putative receptor-like protein kinase 168 261 - -
Eupl02g01075 509 CDD STKc_IRAK 192 458 - -
Eupl02g01075 509 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01075 509 PANTHER OS01G0323000 PROTEIN 1 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01075 Eupl-Chr2 16682065 16685909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01075 2 460 Trihelix Transcription Factor Family AT1G70460 39.224 4.62e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Eupl02g01075 Pkinase 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01075 - - nnu:104587694 847.81