Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01071 ATGGATGAGCTTCTGCTCTCCAAGACAGTACTGGTAGATGAATCAAACCCACCCCCATTCACCCCCACTGGTTTCCTTGACCTCGGTCCCTCTCGCCGTCAATCCTCCGCTTATCTTATTAGCTCGGAAACAGTTAATCCCGTCATCTCCCCCTCGTTCGCTCGCTCGACGCCCAATTCTTCATATGCCAATCTCATAGCCAATTTAAACAAAAAAAGAAAAATTACACGTCGATCACACTCTGCACCTTCGTTATTCACAGACATAAGAGAAGCCTCTTCGGATTCAATTGACCCGAGGCCTGACCGACGATCGACCCCTACAATTGTTCAGCAAGCCTTCATTGGCGTCATCGTGTATATGGTGATCGGTGTTATTGTTTTTACGATGAAAAGTGGAAGTTTCAAGGGTCATTCGACGTTCAGACTAGTAGATGCATTATACTTCAATGTGGTGACTCTTTGCACTATTGGGTATGGCGACATTGTGCCCGATACTACCTTTACGAAACTATTTACATGTGCATTCATACTAGTTGGTTTCGGAATCATCGATATCTTGCTCAACGGGTTGGTAACATATGTGCTCGACAGGCAGGAGGCAGTGTTATTGAGCGCGGTCGATGAGAACCGGTTCAATTCTATGTTTAGAACATACATGATTGACATGGAGAAGCGTAGAATGAGGATACGGATGAAGGTGGGATTGGCTTTAGCAGTTGTGATCGGATGTATCGCAATAGGGACAATCATGGTGCACGTCCTCGAGGATTTGAATTGGACAGACAGCTTTTATTTGTCTGTTACCTCTGTAACCACAGTAGGATATGGTGATTACGGATTCAAGACGGTAAAGGGTAGGTGCTTCGCGATTGTATGGCTGTTATTAAGCACATTGGCTGTTGCTAGGGCCTTCCTGTACCTAACTGAGTTGAGGATTGACAAGCGAAATCGCAAGATCGCAAATTGGGTTCTCCAGAAAAAGATGACCCTAGGCGATTTGATGGCCGCCGACCTCGACAACGATGGATCCATAAGCAAGTCTGAGTATGTAATATACAAGCTCAAGGAGATGGGAAAGATAGCAGAGAAAGACATCCTGCAGATCTGCAACCAGTTTGATAGGCTAGATACTGGCAATTGTGGAAAGATAACTCTTGCTGATCTTATGGAAAACCATCACTGA 1185 0.4515 MDELLLSKTVLVDESNPPPFTPTGFLDLGPSRRQSSAYLISSETVNPVISPSFARSTPNSSYANLIANLNKKRKITRRSHSAPSLFTDIREASSDSIDPRPDRRSTPTIVQQAFIGVIVYMVIGVIVFTMKSGSFKGHSTFRLVDALYFNVVTLCTIGYGDIVPDTTFTKLFTCAFILVGFGIIDILLNGLVTYVLDRQEAVLLSAVDENRFNSMFRTYMIDMEKRRMRIRMKVGLALAVVIGCIAIGTIMVHVLEDLNWTDSFYLSVTSVTTVGYGDYGFKTVKGRCFAIVWLLLSTLAVARAFLYLTELRIDKRNRKIANWVLQKKMTLGDLMAADLDNDGSISKSEYVIYKLKEMGKIAEKDILQICNQFDRLDTGNCGKITLADLMENHH* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01071 394 Pfam Ion channel 240 308 IPR013099 -
Eupl02g01071 394 Pfam Ion channel 117 195 IPR013099 -
Eupl02g01071 394 FunFam Two-pore potassium channel 2-like 108 205 - -
Eupl02g01071 394 Gene3D - 203 334 - -
Eupl02g01071 394 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 143 368 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl02g01071 394 Gene3D - 335 394 - -
Eupl02g01071 394 SUPERFAMILY Voltage-gated potassium channels 106 195 - -
Eupl02g01071 394 ProSitePatterns EF-hand calcium-binding domain. 338 350 IPR018247 -
Eupl02g01071 394 PRINTS Two pore domain K+ channel signature 152 180 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl02g01071 394 PRINTS Two pore domain K+ channel signature 272 281 IPR003280 GO:0005267|GO:0016020|GO:0071805
Eupl02g01071 394 FunFam Two-pore potassium channel 2-like 212 336 - -
Eupl02g01071 394 SUPERFAMILY Voltage-gated potassium channels 222 328 - -
Eupl02g01071 394 Gene3D - 107 202 - -
Eupl02g01071 394 SUPERFAMILY EF-hand 336 390 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01071 Eupl-Chr2 16455748 16480840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01071 17 392 Ion Channels AT4G18160 47.132 1.80e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01071 K05389 - mof:131149370 556.599