Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl02g01071 | ATGGATGAGCTTCTGCTCTCCAAGACAGTACTGGTAGATGAATCAAACCCACCCCCATTCACCCCCACTGGTTTCCTTGACCTCGGTCCCTCTCGCCGTCAATCCTCCGCTTATCTTATTAGCTCGGAAACAGTTAATCCCGTCATCTCCCCCTCGTTCGCTCGCTCGACGCCCAATTCTTCATATGCCAATCTCATAGCCAATTTAAACAAAAAAAGAAAAATTACACGTCGATCACACTCTGCACCTTCGTTATTCACAGACATAAGAGAAGCCTCTTCGGATTCAATTGACCCGAGGCCTGACCGACGATCGACCCCTACAATTGTTCAGCAAGCCTTCATTGGCGTCATCGTGTATATGGTGATCGGTGTTATTGTTTTTACGATGAAAAGTGGAAGTTTCAAGGGTCATTCGACGTTCAGACTAGTAGATGCATTATACTTCAATGTGGTGACTCTTTGCACTATTGGGTATGGCGACATTGTGCCCGATACTACCTTTACGAAACTATTTACATGTGCATTCATACTAGTTGGTTTCGGAATCATCGATATCTTGCTCAACGGGTTGGTAACATATGTGCTCGACAGGCAGGAGGCAGTGTTATTGAGCGCGGTCGATGAGAACCGGTTCAATTCTATGTTTAGAACATACATGATTGACATGGAGAAGCGTAGAATGAGGATACGGATGAAGGTGGGATTGGCTTTAGCAGTTGTGATCGGATGTATCGCAATAGGGACAATCATGGTGCACGTCCTCGAGGATTTGAATTGGACAGACAGCTTTTATTTGTCTGTTACCTCTGTAACCACAGTAGGATATGGTGATTACGGATTCAAGACGGTAAAGGGTAGGTGCTTCGCGATTGTATGGCTGTTATTAAGCACATTGGCTGTTGCTAGGGCCTTCCTGTACCTAACTGAGTTGAGGATTGACAAGCGAAATCGCAAGATCGCAAATTGGGTTCTCCAGAAAAAGATGACCCTAGGCGATTTGATGGCCGCCGACCTCGACAACGATGGATCCATAAGCAAGTCTGAGTATGTAATATACAAGCTCAAGGAGATGGGAAAGATAGCAGAGAAAGACATCCTGCAGATCTGCAACCAGTTTGATAGGCTAGATACTGGCAATTGTGGAAAGATAACTCTTGCTGATCTTATGGAAAACCATCACTGA | 1185 | 0.4515 | MDELLLSKTVLVDESNPPPFTPTGFLDLGPSRRQSSAYLISSETVNPVISPSFARSTPNSSYANLIANLNKKRKITRRSHSAPSLFTDIREASSDSIDPRPDRRSTPTIVQQAFIGVIVYMVIGVIVFTMKSGSFKGHSTFRLVDALYFNVVTLCTIGYGDIVPDTTFTKLFTCAFILVGFGIIDILLNGLVTYVLDRQEAVLLSAVDENRFNSMFRTYMIDMEKRRMRIRMKVGLALAVVIGCIAIGTIMVHVLEDLNWTDSFYLSVTSVTTVGYGDYGFKTVKGRCFAIVWLLLSTLAVARAFLYLTELRIDKRNRKIANWVLQKKMTLGDLMAADLDNDGSISKSEYVIYKLKEMGKIAEKDILQICNQFDRLDTGNCGKITLADLMENHH* | 395 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl02g01071 | 394 | Pfam | Ion channel | 240 | 308 | IPR013099 | - | |
Eupl02g01071 | 394 | Pfam | Ion channel | 117 | 195 | IPR013099 | - | |
Eupl02g01071 | 394 | FunFam | Two-pore potassium channel 2-like | 108 | 205 | - | - | |
Eupl02g01071 | 394 | Gene3D | - | 203 | 334 | - | - | |
Eupl02g01071 | 394 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 143 | 368 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Eupl02g01071 | 394 | Gene3D | - | 335 | 394 | - | - | |
Eupl02g01071 | 394 | SUPERFAMILY | Voltage-gated potassium channels | 106 | 195 | - | - | |
Eupl02g01071 | 394 | ProSitePatterns | EF-hand calcium-binding domain. | 338 | 350 | IPR018247 | - | |
Eupl02g01071 | 394 | PRINTS | Two pore domain K+ channel signature | 152 | 180 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Eupl02g01071 | 394 | PRINTS | Two pore domain K+ channel signature | 272 | 281 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Eupl02g01071 | 394 | FunFam | Two-pore potassium channel 2-like | 212 | 336 | - | - | |
Eupl02g01071 | 394 | SUPERFAMILY | Voltage-gated potassium channels | 222 | 328 | - | - | |
Eupl02g01071 | 394 | Gene3D | - | 107 | 202 | - | - | |
Eupl02g01071 | 394 | SUPERFAMILY | EF-hand | 336 | 390 | IPR011992 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl02g01071 | Eupl-Chr2 | 16455748 | 16480840 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl02g01071 | 17 | 392 | Ion Channels | AT4G18160 | 47.132 | 1.80e-113 | 337 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl02g01071 | K05389 | - | mof:131149370 | 556.599 |