Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01065 ATGGCTGCTGCGTATCTAATGTCTCCTTCTGTTGGATCCAAGAGTACTACTGATCTATCACGGGAAACGGATAATAGCAATAATCAAAGTTCTTGCGTCGACGAAAAAGGTTTACTGGTGGTAACGACGAACATGCCAGCAGTGACCAGAAAGGGAGAATCCATTAGGCGGCCTCGCGGACGGCCGGCTGGTTCAAAGAATAAACCAAAGGCACCCATCATCATCACCCAAGAAAGTGCTAACACCCTCCGAGCTCATGCAATGGAGGTGAGCTCTGGGTATGATGTTAGTGAGAGCATAGCTAACTTTGCTAGGAGGAAGCAACATGGTATCTGCATACTTAGTGGGACTGGGTGTGTGATGAATGTCACCCTGCGACAACCCTCTTCTTCTGGTGCAATTGTGATTCTCCATGGACGGTTTGAAATCCTCTCCTTGTTAGGATCATTCTTGCCTCCACCAGCTCCTCCTGGGATTACTGGCCTTACAATCTACTTAACCGGGGCACAAGGACAAGTAGTGGGTGGGGCTGTTGTTGGGCCTCTTATTGCTTCAGGTCCTGTGGTGATCATGGTTGCATCTTTCATGAACGCGACTTTCGATCGTCTTCCATTGGATGACGACGAGGTTGTTGCTGCTCATAATCAACATTACCAAAACAACCATCACCATTACCACCACCACATGGAAGCGTCGAAATTGTATGGGGTTCCAGTACCAAACTTGCTTAGCAATGGTAGTTTGCCCTTTGAGACTTACTCTTGGGCACCCCATTCAAAAAACTAG 786 0.4784 MAAAYLMSPSVGSKSTTDLSRETDNSNNQSSCVDEKGLLVVTTNMPAVTRKGESIRRPRGRPAGSKNKPKAPIIITQESANTLRAHAMEVSSGYDVSESIANFARRKQHGICILSGTGCVMNVTLRQPSSSGAIVILHGRFEILSLLGSFLPPPAPPGITGLTIYLTGAQGQVVGGAVVGPLIASGPVVIMVASFMNATFDRLPLDDDEVVAAHNQHYQNNHHHYHHHMEASKLYGVPVPNLLSNGSLPFETYSWAPHSKN* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01065 261 CDD DUF296 84 195 IPR005175 -
Eupl02g01065 261 MobiDBLite consensus disorder prediction 9 35 - -
Eupl02g01065 261 MobiDBLite consensus disorder prediction 47 70 - -
Eupl02g01065 261 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Eupl02g01065 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 210 - -
Eupl02g01065 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 223 IPR014476 GO:0003680
Eupl02g01065 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 196 IPR005175 -
Eupl02g01065 261 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Eupl02g01065 261 MobiDBLite consensus disorder prediction 1 35 - -
Eupl02g01065 261 Gene3D - 83 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01065 Eupl-Chr2 16355978 16356763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01065 1 260 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 56.818 9.09e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01065 - - nnu:104587705 338.191