LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl02g01048	ATGGTTTTCTTGGTTTGGAGTACAGTTTTACATGATCTGGTTTTCATCTTCTTAAGATCTGAAACCTGCTTCCTTTACCATTTTCATCAAGAGAATTCTACAGAGATGGACTTCTTCACTGAGTATGGGGACTCCAGTAGATACAAAATTCAGGAGGTCGTAGGGAAAGGAAGTTATGGTGTCGTGTGCTCAGCCATTGATACACATACTGGAGAAAAAGTGGCAATAAAGAAAATACATGATATTTTTGAACACATCTCTGATGCTGCTAGAATACTTCGCGAGATAAAGCTGCTCAGGCTTCTTCGACATCCTGACATCGTTGAAATCAAACATATCATGTTGCCACCTTCAAGAAGGGATTTTAAAGATATATTTGTCGTTTTTGAGCTCATGGAGTCGGATCTTCACCAAGTCATCAAAGCTAATGATGACTTGACACGGGAACACTATCAGTTTTTCCTTTATCAGCTGCTACGAGCATTGAAATATATCCATACGGCGAATGTATACCATCGAGATTTGAAACCAAAGAATATATTGGCAAATGCCAATTGCAAACTCAAAATTTGTGACTTTGGGTTAGCTAGAGTTGCATTCAACGATACCCCTACGACAATATTTTGGACGGATTATGTTGCCACAAGATGGTATAGAGCTCCAGAGCTGTGTGGATCATTTTTCTCTAAGTATACACCTGCAATTGATATTTGGAGTATAGGCTGCATTTTTGCAGGAGGTATTAACAGGGAAGCCACTGTTCCCTGGTAA	771	0.3943	MVFLVWSTVLHDLVFIFLRSETCFLYHFHQENSTEMDFFTEYGDSSRYKIQEVVGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIFVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAGGINREATVPW*	257

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl02g01048	256	FunFam	Mitogen-activated protein kinase	37	142	-	-
	Eupl02g01048	256	SUPERFAMILY	Protein kinase-like (PK-like)	45	245	IPR011009	-
	Eupl02g01048	256	ProSiteProfiles	Protein kinase domain profile.	48	256	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl02g01048	256	FunFam	Mitogen-activated protein kinase	132	255	-	-
	Eupl02g01048	256	Pfam	Protein kinase domain	48	249	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl02g01048	256	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	47	249	-	-
	Eupl02g01048	256	ProSitePatterns	MAP kinase signature.	83	186	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
	Eupl02g01048	256	Gene3D	Phosphorylase Kinase; domain 1	46	131	-	-
	Eupl02g01048	256	Gene3D	Transferase(Phosphotransferase) domain 1	132	252	-	-
	Eupl02g01048	256	SMART	serkin_6	48	253	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl02g01048	256	ProSitePatterns	Protein kinases ATP-binding region signature.	54	78	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl02g01048	Eupl-Chr2	15972837	15977062	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl02g01048	30	245	MAP Kinase Gene Family	AT2G42880	92.593	8.09e-153	432

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Eupl02g01048		Pkinase	2.5e-54	CL0016