Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01039 ATGGAAGAGAAAACTGAAGATGGAGACGCATTGAAGAGCAAAAGAGGAGAATCGGTTCATGGAGGAGATGAAAAGAAGATTCCATTCTACAAGCTCTTTACATTCGCAGACCGACTCGACGTCGTGTTGATGATTGTTGGGACGATTTCTTCCATCGGAAACGGTCTCGTCGTACCGCTTTCGACACTAATATATGGTCAGATTATCAACTCCTTCGGTCATTCAGACAATTCACATGTTGTTCATGAAGTATCCAAGGCTTCCCTAAACTTCGTGTACTTGGCTATTGGAGCGGGTGTCGTGGCGTTCTTACAGGTGTCTAGCTGGATGGTAACAGGAGAGAGACAGGCAGCCCGTATTCGGGGTTTGTACCTGAAAACCATACTAAGACAAGACATCACATTCTTCGACACGGAAACAACAACTGGAGAAGTCGTCGAGAGAATGTCTGGGGATACCATTCTCATTCAAGATGCCATGGGTGAAAAGGTTGGGAAGTGCATACAACTCATTTTAAGTTTTCTTGGTGGTTTTGCAATTGCATTTGCAAAAGGGTGGCGCCTCTCACTGGTAATTCTTTCATGCATTCCTCCCCTCGTAATTGCTGGCAGCGTCATGTCGATATTCATTTCAAAAATGTCGAACCGTGGACAAATTGCATATGCCGAAGCTGGAAATATTGTCGAACAAACAGTCGGAGCTATTAGAACTGTTGCATCCTTTACTGGAGAAAAGTTTGCCATAGAAAAATATAACAGATCACTACGAACTGCAGATGCCTTCACCATTAAACAAGGGTTCGGTTCTGGCTTAGGACTCAGTGTAGTTTTAGCAATCATGTTCAGTAGTTATGGACTAGCTGTGTGGTATGGTGCCAAGCTGATCATCGAGAAAGGATACAATGGTGGACAAGTCATCAATGTCATAATGTCAATCATGACTGGTGGAATGTCCCTTAGTCAGGCATCCCCAGGCTTGAATGCATTTGCGGCAGGACAAGCTGCAGCTTACAAGATGTTTGAGACGATCAAACGGAAACCACTGATCGATGCCTACGACACGAGTGGGGCAGTATTAGAAGAAATTAAGGGTGATGTCGAATTGAAAGATGTGTACTTTAGCTACCCGGCAAGGCCTGATGTTCAGATATTTTCCAGCTTCTCACTGCGTATTCCAAGTGGCACAACTGTAGCATTAGTTGGACAAAGTGGAAGTGGGAAGTCGACGGTGATCAGCTTGGTGGAGAGATTCTATGATCCCCATGCTGGTGAAGTTCTTATAGATGGTATCAACTTGAAGAAGTTGCAGCTCAAATGGATAAGGGAGAAGATTGGGCTCGTTAGCCAGGAACCGATATTGTTTTCAACTACTATAAAAGAGAACATCACATATGGGAAGGAAAATGCAACACATGAAGAAATTAGGACCGCGATTGAGCTTGCTAATGCTGCAGAGTTCATTGACAAGTTTCCCAAGGGGCTTGACACAATGGTAGGTGAGCATGGAACCCAACTGTCTGGTGGACAGAAGCAAAGGATTGCAATTGCAAGGGCCATCATAAAAAACCCAAAGATCCTACTTCTTGATGAGGCAACAAGCGCATTGGATGCCGAGTCTGAACGAATAGTTCAAGATGCACTAGTAGGAATCATGTCCTATCGTACAACTCTGGTTGTCGCTCATCGTTTGACCACAATTAGGAATGCCGATATCATAGCAGTGGTGCATCATGGGAAGATTGTGGAACAAGGAACTCACAAGAAGTTGACCAAGGACCCTAATGGGGCTTACTCTCAACTCATTCTTCTACAAGAGGGGACTAAACAAGCTGAAGATGTGCTACCTGCGGACCCAGATGAGGTAGATTTGAGCTCGGATGCTGATAATACGACTGGAAGATCTAGGAACCAAAGGCTATCTAGAAAGAGATCCATATGCAGAGGTTCATCAGGAAGTCATTCTATTGGCCTTCATGAGACAAAAAATGGAGAAGACAGCCTTGAAAGGGGTGAACAGGATGAGGAGGTGTGCCACAAGGTCTCCATTACACGGTTGGCATACATGAACAAGCCAGAGGTGCCAATTCTGTTGCTAGGATCCATTGCTGCTGCCATACATGGCGTGATCTTCCCTGTTTCTGGACTCTTGTTATCAAGTGCAATCAAAATCTTTTTTGAATCCCCGCGTGAGCTTCGAAAAGATTCTACGCTTTGGGCCCTCATGTTTGTAGGTCTAGGTTTCATTGCTCTAGTTTCCGTGCCGGTGCAACAATACTTCTTTGGAGTTGCAGGTGGTAAACTGATCCAACGCATCCGATCCATGTGTTTTGAGAGGGTGGTGCACCAGGAAATCAGCTGGTTCGATGACCCTACAAATTCAAGTGGGGCGATTGGTGCAAGGTTATCTGCCGATGCTTCGATGGTGCGAAGTCTAGTAGGTGATGTCTTGGCCCTAATGGTTCAGAACATATCAACGATGACAGCAGGACTTATCATAGCATTCACAGCTAATTGGCGATTGGCACTAATAGTTCTAGTTTTGCTGCCCTTGGTGGTTTTGCAAGAATATGCTCAGATTAAGTTCTTAACGGGTTTCAGTGCAGATGCAAAGGTAAAGTATGAAGAGGCGAGTCAAGTTGCAAATGATGCTGTGGGTAGCATTCGAACGGTTGCTTCCTTTTGTGCAGAACAAAAGGTGATGGATCTTTACCAGAAGAAATGTGAAGCTCCCATGAAACAAGGAGTCCGACTAGGAGTCATAAGTGGTGCAGGCTTTGGCTTCTCCTTTGTCGCACTATATTGCACTAATGCCATCTGTTTTTATATTGGAGCTCTTCTTGTACAAGATGGAAAAGCAACCTTCGGACAGGTTTTCAAGGTTTTCTTTGCTCTGACGGTTTCAGCAGTTGGGATTTCACTAACGAGTGCAATAGCTCCAGACACTAACAAAGCTAAGGATTCCGCTGCGTCCATTTTTAAACTTCTTGACAGCAAATCCAAGATTGATTCAAGCAACAATGAAGGTACAACACTAACTAGTGTGAGGGGTGACATTGAGTTCCAACATGTCAGCTTCAAATACCCGACACGCCCAGATGTGGAAATCTTCAAAGACTTGTGCTTGAGCATCCCCTCTGGAAAGACTGTTGCTCTTGTGGGAGAGAGTGGTAGTGGGAAATCAACAGTCATCAGCCTACTAGAGAGGTTCTACGATCCCAATTCAGGCCATATATTGCTAGATGGAGTGAAGATTCAAACACTCGAGATAACTTGGTTGAGGCAACAAATGGGCTTGGTAGGCCAAGAGCCTATACTATTCAATGAAACAATTCGTGCGAACATAGCTTATGGGAAGCAAGGAGGTGCATCTGAAGATGAGATCATTACAGCAACAAAAGCAGCCAATGCACATAGTTTCATATCAGGGCTGCCGCAAGGCTACGATACCTCCGTAGGGGAGAGAGGGGTACAGTTATCAGGTGGGCAGAAGCAACGGATAGCTATTGCGAGGGCAATATTAAAGGACCCTAAGATCCTTCTACTTGATGAGGCAACTAGTGCACTAGATGCAGAATCAGAGCGTGTAGTACAAGATGCATTAGATAAGGTAATGATGAATAGGACAACTATTGTTGTTGCTCACCGCCTATCCACAATCAAGGGGGCTGATATCATTTCAGTGGTGAAGAATGGTGTGATTGCTGAAAAAGGAGGACATGAGGTGTTGATGAAAGTAAGGGATGGGGCCTACGCATCTCTTGTGTCACTTCACATGAGGTCGTCCACATAA 3789 0.4484 MEEKTEDGDALKSKRGESVHGGDEKKIPFYKLFTFADRLDVVLMIVGTISSIGNGLVVPLSTLIYGQIINSFGHSDNSHVVHEVSKASLNFVYLAIGAGVVAFLQVSSWMVTGERQAARIRGLYLKTILRQDITFFDTETTTGEVVERMSGDTILIQDAMGEKVGKCIQLILSFLGGFAIAFAKGWRLSLVILSCIPPLVIAGSVMSIFISKMSNRGQIAYAEAGNIVEQTVGAIRTVASFTGEKFAIEKYNRSLRTADAFTIKQGFGSGLGLSVVLAIMFSSYGLAVWYGAKLIIEKGYNGGQVINVIMSIMTGGMSLSQASPGLNAFAAGQAAAYKMFETIKRKPLIDAYDTSGAVLEEIKGDVELKDVYFSYPARPDVQIFSSFSLRIPSGTTVALVGQSGSGKSTVISLVERFYDPHAGEVLIDGINLKKLQLKWIREKIGLVSQEPILFSTTIKENITYGKENATHEEIRTAIELANAAEFIDKFPKGLDTMVGEHGTQLSGGQKQRIAIARAIIKNPKILLLDEATSALDAESERIVQDALVGIMSYRTTLVVAHRLTTIRNADIIAVVHHGKIVEQGTHKKLTKDPNGAYSQLILLQEGTKQAEDVLPADPDEVDLSSDADNTTGRSRNQRLSRKRSICRGSSGSHSIGLHETKNGEDSLERGEQDEEVCHKVSITRLAYMNKPEVPILLLGSIAAAIHGVIFPVSGLLLSSAIKIFFESPRELRKDSTLWALMFVGLGFIALVSVPVQQYFFGVAGGKLIQRIRSMCFERVVHQEISWFDDPTNSSGAIGARLSADASMVRSLVGDVLALMVQNISTMTAGLIIAFTANWRLALIVLVLLPLVVLQEYAQIKFLTGFSADAKVKYEEASQVANDAVGSIRTVASFCAEQKVMDLYQKKCEAPMKQGVRLGVISGAGFGFSFVALYCTNAICFYIGALLVQDGKATFGQVFKVFFALTVSAVGISLTSAIAPDTNKAKDSAASIFKLLDSKSKIDSSNNEGTTLTSVRGDIEFQHVSFKYPTRPDVEIFKDLCLSIPSGKTVALVGESGSGKSTVISLLERFYDPNSGHILLDGVKIQTLEITWLRQQMGLVGQEPILFNETIRANIAYGKQGGASEDEIITATKAANAHSFISGLPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDALDKVMMNRTTIVVAHRLSTIKGADIISVVKNGVIAEKGGHEVLMKVRDGAYASLVSLHMRSST* 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01039 1262 FunFam ABC transporter B family member 1 356 605 - -
Eupl02g01039 1262 MobiDBLite consensus disorder prediction 617 673 - -
Eupl02g01039 1262 FunFam ABC transporter B family member 9 31 362 - -
Eupl02g01039 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1007 1257 IPR027417 -
Eupl02g01039 1262 MobiDBLite consensus disorder prediction 658 673 - -
Eupl02g01039 1262 CDD ABC_6TM_Pgp_ABCB1_D2_like 686 1001 - -
Eupl02g01039 1262 CDD ABC_MTABC3_MDL1_MDL2 366 604 - -
Eupl02g01039 1262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 366 602 IPR003439 GO:0005524
Eupl02g01039 1262 PANTHER ABC TRANSPORTER B FAMILY 3 603 IPR039421 -
Eupl02g01039 1262 Gene3D - 1008 1261 IPR027417 -
Eupl02g01039 1262 MobiDBLite consensus disorder prediction 643 657 - -
Eupl02g01039 1262 Pfam ABC transporter 386 533 IPR003439 GO:0005524
Eupl02g01039 1262 Pfam ABC transporter transmembrane region 697 968 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01039 1262 Pfam ABC transporter transmembrane region 44 316 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01039 1262 FunFam ABC transporter B family member 1 1008 1258 - -
Eupl02g01039 1262 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01039 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 604 IPR027417 -
Eupl02g01039 1262 SMART AAA_5 393 581 IPR003593 GO:0016887
Eupl02g01039 1262 SMART AAA_5 1045 1238 IPR003593 GO:0016887
Eupl02g01039 1262 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 327 - -
Eupl02g01039 1262 ProSitePatterns ABC transporters family signature. 1158 1172 IPR017871 GO:0005524|GO:0016887
Eupl02g01039 1262 CDD ABC_MTABC3_MDL1_MDL2 1018 1254 - -
Eupl02g01039 1262 SUPERFAMILY ABC transporter transmembrane region 31 350 IPR036640 GO:0005524|GO:0016020
Eupl02g01039 1262 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1018 1255 IPR003439 GO:0005524
Eupl02g01039 1262 Pfam ABC transporter 1037 1186 IPR003439 GO:0005524
Eupl02g01039 1262 MobiDBLite consensus disorder prediction 1 21 - -
Eupl02g01039 1262 FunFam ABC transporter B family member 1 676 984 - -
Eupl02g01039 1262 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 697 983 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01039 1262 SUPERFAMILY ABC transporter transmembrane region 684 996 IPR036640 GO:0005524|GO:0016020
Eupl02g01039 1262 Gene3D - 364 630 IPR027417 -
Eupl02g01039 1262 Gene3D ABC transporter type 1, transmembrane domain 90 992 IPR036640 GO:0005524|GO:0016020
Eupl02g01039 1262 ProSitePatterns ABC transporters family signature. 505 519 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01039 Eupl-Chr2 15804681 15819711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01039 25 1262 Calmodulin-binding Proteins AT2G36910 43.895 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01039 K05658 - nnu:104608957 1927.91