Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01038 ATGTGTTCATCACTGAATTATGTCCCAGAGGAAGGTTTCTTGGCCGGCTATAGGAAACAACAGAGAGATCAAGAGAAAGGGAGATATATAGAGATGGAAGAGAGAACTGAAAATGGAGACGCATTGAAGAGCAAAAGAGGAGAATCGGGTCATGGAGGAGATGAAGAGAAGATTCCGTTCTACAAGCTCTTTACATTCGCAGACCGACTCGACATCGTGTTGATGGTTGTTGGGACGATTTCTGCCATCGGAAATGGTCTCGTCATGCCGCTTTCGACACTAATATTTGGTCAGATTATCAACTCCTTCGGTGATTCAGACAATTCAAATGTTGTTCATGAAGTATCCAAGGTTTCCCTAAGGTTCGTGTACTTGGCCATCGGAGCGGGAGTGGTGGCGTTCTTACAGGTGTCCAGTTGGATGGTAACAGGAGAGAGACAGGCAGCCCGTATTCGGGGTTTGTACCTGAAAACCATACTAAGACAAGACATCACATTCTTCGACACTGAAACAACAACTGGAGAAGTCGTCGAGAGAATGTCTGGGGATACCATTCTCATTCAAGATGCCATGGGTGAAAAGGTTGGGAAGTTCATACAACTCATTTCAACTTTTATTGGCGGTTTTGCAATTGCATTTGCAAGAGGGTGGCGTCTCGCACTGGTAATGATGTCATGCATTCCTCCCCTTGTAATTATTGGCAGCACCGTGTTTATATTCATTACAAAAATGTCTAGCCGTGGACAAGTTGCATATGCTGAATCCGGAAATATTGTAGAACAAACAGTCGGAGCTATTAGAACTGTTGCATCCTTTACCGGAGAAAAGTTTGCCAAAGAAAAATATAACAGATCACTACGAACTGCATATGCCTTCACGGTTAAACAAGGGTCCGGTTATGGCTTAGGAATCGGTATAGTTTTAGCAGTCATGTTCAGCAGTTACGGACTAGCTGTGTGGTATGGTGCCAAGCTGATCATCGAAAAAGGATACAACGGCGGACAAGTCATCAATGTCATAATGTCAATCGTGACTGGGGGAATGTCCCTAGGTCAGGCATCCCCAGGCTTGAATGCATTTGCGGCAGGGCAAGCTGCAGCTTACAAGATGTTTGAAACAATCAAAAGGAAACCACTGATAGACGCCTACGACACGAGTGGGGCAATATTAGAAGACATCAAGGGTGATATTGAATTGAAAGATGTGTACTTCAGTTACCCGGCAAGGCCTGATGTTCAAATATTTTCTAGCTTCTCACTGTGTGTTCCAAGTGGCACAACGACTGCATTAGTTGGACAAAGTGGAAGTGGGAAGTCGACGGTGATCAGCCTGGTGGAGAGATTCTATGATCCCCATGCTGGTGAAATTCTTATCGATGGTATCAACTTGAAGAAGTTGCAACTCAAATGGATAAGGGAGAAGATTGGGCTCGTTAGCCAGGAACCGATATTGTTTGCAACTACTATAAAAGAGAACATTGCATATGGGAAGGAAAATGCGACATATGAAGAAATTAGGACAGCAATTGAGCTTGCTAATGCTGCAGAGTTCGTTGACAAGTTTCCCAAGGGGCTTGACACAATGGTAGGTGAGCATGGAGCCCAACTGTCTGGTGGACAGAAGCAAAGGATTGCAATTGCAAGGGCCATCTTAAAAAACCCAAAGATCCTACTTCTTGATGAGGCAACAAGCGCATTGGATGCTGAGTCTGAACGCATAGTTCAAGATGCACTAGTAGGAATCATGTCATATCGAACTACTCTGGTTGTCGCTCATCGTTTGACCACAATTAGGAATGCCGATATCATAGCAGTGGTGCATCATGGGGAGATTGTGGAACAAGGAACTCACAACGAGTTGACCAAGGATCCTAATGGGGCTTACTCTCAACTCATTCGTCTGCAAGAGGGGACTAAACAAGCTGAAGATGTGCTACCTGAGGACCCAGATGAGGCAGATTTGAGCGTGGATGCTGATATGACAATTGGCAGATCTGGGAGCCAGCATAGGCTATCCGTAAAGAGATCCATAAGCAGAGGTTTGTCAGGAAGTCGTTCTATAGGCCTTCATGAGACTGAAAATGGAGAGGACAAAATTGAAAGTGGTGAACAGGATGAGGAGGTGCGCCGCAAGGTCTCCATTACACGGTTGGCATACATGAACAAGCCAGAGGTGCCAATTCTGTTGCTAGGATCCATTGGCGCAGCCATACATGGTGTGATCTTTCCTGTGTCTGGACTCTTGCTATCGAGTGCAATCAAAATATTTTTTGAACCACCCCGTGAGCTCCGAAAAGATTCTAGGTTTTGGGCCCTCATGTACGTGGTTCTAGGTTGCATTGCTCTAGTTTCCTTGCCGGTGCAGCAATACTTCTTTGGAGTTGCAGGTGGTAAACTGATCCAACGCATCCGATCCATGTGCTTTGAAAGGGTGGTGCACCAGGAAATCAGCTGGTTCGATGACCCTACAAATTCAAGTGGGTCGATTGGTGCAAGGTTATCTGTTGACGCTTCGACTGTGCGAAGTCTAGTTGGCGATGCCTTGGCCCTAATGGTTCAGAACATATCAACAATGATAGCAGGACTTATCATAGCATTCACAGCTAATTGGCGATTGGCACTTATAGTTCTGGTTTTACTGCCCTTGGTGGGTTTGCAAGGATATGCTCAGGTTAAGTTTTTAAGGGGTTTCAGTGCAGATGCAAAGATGAAGTATGAAGAGGCAAGTCATGTTGCAAATGATGCTGTGGGTGGCATCCGAACGGTTGCTTCCTTCTGTGCAGAACAAAAGGTGATGGATCTTTACCACAAGAAATGTGAAGCTCCCATGAAACAAGGAGTCCGACTAGGAGTAGTAAGTGGTGCAGGCTTTGGCTTCTCCTTTGTTGCACTGTATTGCACGAATGCCCTCTGTTTTTATATGGGAGCTCTTCTTGTACAAGATGGGAAAGCAACTTTCGGACAGGTTTTCAAGGTTTACTTTGCTTTGACAATTGCAGCAGTTGGGATTTCACAAACAAGTGCAATAGCTCCAGACACTAACAAAGCTAAGGATTCCGCTGCTTCCATTTTTAAACTTCTTGACAACAAATCCAAGATTGATTCAAGCAACGATGAAGGCACAACACTAGCCAGTGTGAGGGGTGACATTGAGTTCCAACATGTCAGCTTCAAATACCCAACACGCCCAGATGTGCAAATCTTCAAAGACTTGTGCTTGAGCATCCCCTCTGGAAAGACTGTTGCTCTTGTGGGAGAGAGTGGTAGTGGGAAATCAACAGTCATCAGCCTACTAGAGAGGTTCTACGATCCCAACTCAGGCCATATATTGCTAGATGGAGTGAAGATTCAAACACTCAAGATAACTTGGTTGAGGCAACAAATGGGCTTGGTAGGCCAAGAGCCTATACTATTCAATGAAACAATTCGTGCCAACATAGCTTATGGGAAGCAAGGAGGTGCATCTGAAGATGAGATCATTACAGCAACAAAAGCAGCCAACGCACATAGTTTCATATCAGCGCTACCGCAAGGCTATGATACCTCGGTAGGGGAGAGAGGGGTACAATTATCAGGTGGACAGAAGCAACGGATAGCTATTGCGAGGGCAATATTGAAGGACCCTAAGATCCTTCTGCTTGATGAGGCAACGAGTGCCCTAGATGCAGAATCAGAGCGTGTAGTACAAGATGCATTAGATAGGGTAATGATGAACAGGACGACTGTTGTTGTTGCTCATCGCCTATCTACAATCAAGGGGGCTGATATCATTTCAGTGGTGAAGAATGGTGTGATTGCGGAAAAAGGAAGACATGAGGTATTGATGAAAATAAGCGATGGGGCCTACGCATCTCTTGTGTCACTTCACATGAGTTCTTCCACATAA 3885 0.4517 MCSSLNYVPEEGFLAGYRKQQRDQEKGRYIEMEERTENGDALKSKRGESGHGGDEEKIPFYKLFTFADRLDIVLMVVGTISAIGNGLVMPLSTLIFGQIINSFGDSDNSNVVHEVSKVSLRFVYLAIGAGVVAFLQVSSWMVTGERQAARIRGLYLKTILRQDITFFDTETTTGEVVERMSGDTILIQDAMGEKVGKFIQLISTFIGGFAIAFARGWRLALVMMSCIPPLVIIGSTVFIFITKMSSRGQVAYAESGNIVEQTVGAIRTVASFTGEKFAKEKYNRSLRTAYAFTVKQGSGYGLGIGIVLAVMFSSYGLAVWYGAKLIIEKGYNGGQVINVIMSIVTGGMSLGQASPGLNAFAAGQAAAYKMFETIKRKPLIDAYDTSGAILEDIKGDIELKDVYFSYPARPDVQIFSSFSLCVPSGTTTALVGQSGSGKSTVISLVERFYDPHAGEILIDGINLKKLQLKWIREKIGLVSQEPILFATTIKENIAYGKENATYEEIRTAIELANAAEFVDKFPKGLDTMVGEHGAQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVGIMSYRTTLVVAHRLTTIRNADIIAVVHHGEIVEQGTHNELTKDPNGAYSQLIRLQEGTKQAEDVLPEDPDEADLSVDADMTIGRSGSQHRLSVKRSISRGLSGSRSIGLHETENGEDKIESGEQDEEVRRKVSITRLAYMNKPEVPILLLGSIGAAIHGVIFPVSGLLLSSAIKIFFEPPRELRKDSRFWALMYVVLGCIALVSLPVQQYFFGVAGGKLIQRIRSMCFERVVHQEISWFDDPTNSSGSIGARLSVDASTVRSLVGDALALMVQNISTMIAGLIIAFTANWRLALIVLVLLPLVGLQGYAQVKFLRGFSADAKMKYEEASHVANDAVGGIRTVASFCAEQKVMDLYHKKCEAPMKQGVRLGVVSGAGFGFSFVALYCTNALCFYMGALLVQDGKATFGQVFKVYFALTIAAVGISQTSAIAPDTNKAKDSAASIFKLLDNKSKIDSSNDEGTTLASVRGDIEFQHVSFKYPTRPDVQIFKDLCLSIPSGKTVALVGESGSGKSTVISLLERFYDPNSGHILLDGVKIQTLKITWLRQQMGLVGQEPILFNETIRANIAYGKQGGASEDEIITATKAANAHSFISALPQGYDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDALDRVMMNRTTVVVAHRLSTIKGADIISVVKNGVIAEKGRHEVLMKISDGAYASLVSLHMSSST* 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01038 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 76 362 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01038 1294 FunFam Os01g0533900 protein 708 1016 - -
Eupl02g01038 1294 Pfam ABC transporter 417 564 IPR003439 GO:0005524
Eupl02g01038 1294 Gene3D ABC transporter type 1, transmembrane domain 1018 1039 IPR036640 GO:0005524|GO:0016020
Eupl02g01038 1294 Gene3D ABC transporter type 1, transmembrane domain 708 1017 IPR036640 GO:0005524|GO:0016020
Eupl02g01038 1294 Gene3D - 1040 1289 IPR027417 -
Eupl02g01038 1294 Gene3D - 387 636 IPR027417 -
Eupl02g01038 1294 ProSitePatterns ABC transporters family signature. 1190 1204 IPR017871 GO:0005524|GO:0016887
Eupl02g01038 1294 Pfam ABC transporter transmembrane region 76 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01038 1294 Pfam ABC transporter transmembrane region 729 1000 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl02g01038 1294 Pfam ABC transporter 1069 1218 IPR003439 GO:0005524
Eupl02g01038 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1050 1287 IPR003439 GO:0005524
Eupl02g01038 1294 MobiDBLite consensus disorder prediction 690 704 - -
Eupl02g01038 1294 FunFam ABC transporter B family member 9 62 392 - -
Eupl02g01038 1294 Gene3D ABC transporter type 1, transmembrane domain 62 642 IPR036640 GO:0005524|GO:0016020
Eupl02g01038 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1039 1288 IPR027417 -
Eupl02g01038 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 635 IPR027417 -
Eupl02g01038 1294 CDD ABC_6TM_Pgp_ABCB1_D2_like 718 1033 - -
Eupl02g01038 1294 CDD ABC_6TM_Pgp_ABCB1_D1_like 75 358 - -
Eupl02g01038 1294 SUPERFAMILY ABC transporter transmembrane region 62 381 IPR036640 GO:0005524|GO:0016020
Eupl02g01038 1294 MobiDBLite consensus disorder prediction 665 704 - -
Eupl02g01038 1294 FunFam ABC transporter B family member 1 1040 1290 - -
Eupl02g01038 1294 MobiDBLite consensus disorder prediction 665 689 - -
Eupl02g01038 1294 CDD ABC_MTABC3_MDL1_MDL2 1050 1286 - -
Eupl02g01038 1294 SMART AAA_5 1077 1270 IPR003593 GO:0016887
Eupl02g01038 1294 SMART AAA_5 424 616 IPR003593 GO:0016887
Eupl02g01038 1294 CDD ABC_MTABC3_MDL1_MDL2 397 635 - -
Eupl02g01038 1294 FunFam ABC transporter B family member 1 387 636 - -
Eupl02g01038 1294 PANTHER ABC TRANSPORTER B FAMILY 37 636 IPR039421 -
Eupl02g01038 1294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 397 633 IPR003439 GO:0005524
Eupl02g01038 1294 MobiDBLite consensus disorder prediction 28 53 - -
Eupl02g01038 1294 SUPERFAMILY ABC transporter transmembrane region 716 1028 IPR036640 GO:0005524|GO:0016020
Eupl02g01038 1294 ProSitePatterns ABC transporters family signature. 536 550 IPR017871 GO:0005524|GO:0016887
Eupl02g01038 1294 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 729 1015 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01038 Eupl-Chr2 15786697 15799423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01038 58 1294 Calmodulin-binding Proteins AT2G36910 43.955 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01038 K05658 - nnu:104608957 1950.25