Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01013 ATGCCTGGGAACAATAACAACTGTAATCCTGCTGTCCCTACTACTAGATTGGAAAGGCTCCTGAGAGAAAGAGAGTTAAGGAAATTCAACAGGACTTTTCACCCGAATGAGGAGGTGAGTGATGGTAACAGGGAGCCTGATCTATTTGAGCATGAATTGAGCTTAAACGATGGTAATAACTGGGAAATTCCGCATGAGGAAGAGATCTTGGAAGCAGCTGCGGCAACAAGAGCACTCAGCGAGGGATATGGAAGGCAAGATGGAAGGCCTTCCAAACAACGACTGTTGGTGGTGGCCAACAGGTTACCTGTCTCTGCTGTTAGGAAGGGCGAGAACTCATGGTCACTAGAGATAAGTGCAGGGGGCCTAGTCACTGCTCTTCTGGGTGTGAAGGAATTTGAGGCAAAATGGATTGGGTGGGCTGGTGTAAATGTACCAGACGAGATTGGGCAGAGAGCGCTTACCAAGGCCCTAGCTGAAAAGCGGTGCATTCCTGTTTTCCTTGACGAAGAAATAGTACATCAATACTATAATGGTTACTGCAACAACATCCTGTGGCCTCTTCTCCATTATCTTGGGCTTCCACAAGAAGACCGCCTTGCAACCACACGTAGTTTTCAGTCTCAATTTGATGCATATAAAAAAGCAAACCAAATGTTTGCTGATGTGGTAAACAAGCATTATGAAGAGGGAGATGTCGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCGAAATGCCTGAAGGAGTATAACAGTGAAATGAAAGTTGGTTGGTTTCTCCACACGCCTTTTCCTTCTTCAGAAATCCATAGGACACTGCCATCTCGATCAGAGCTGCTGAGATCTGTTCTTGCTGCTGATTTAGTTGGTTTCCATACTTATGATTATGCAAGGCACTTTGTTAGTGCTTGCACTCGTATCCTTGGGTTTGAGGGCACACCCGAAGGTGTAGAGGATCAAGGAAAGCTGACTCGGGTCGCTGCGTTTCCTATTGGTATAGATTCTGATCGGTTCATTAGAGCACTTGAGCTTCCACGAGTCCAAGATCACATTAAGGAACTGAAGAGAAGATTTGCTGACCGAAAGGTAATGTTAGGAGTTGATCGTCTTGATATGATTAAAGGAATTCCCCAAAAGATATTGGCATTTGAAAAGTTCCTTGAAGAAAACCCAGACTGGCGTGATAAAGTGGTGTTGCTGCAAATTGCTGTGCCAACAAGAACAGATGTTCCCGAGTATCAAAAACTTACAAGCCAGGTTCACGAAATTGTTGGACGCATTAATGGCAGATTTGGAACTTTGACTGCTGTTCCAATACACCACCTGGATCGGTCTCTCGACTTTCATGCATTATGTGCACTATATGCAGTCACTGATGTAGCTCTTGTTACTTCATTGAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTTGCATGTCAAGATTCAAAGAAAGGAGTTCTCATTCTAAGTGAGTTTGCAGGAGCTGCACAATCTCTTGGTGCTGGAGCTATCCTTGTGAACCCATGGAACATCACAGAAGTTGCTTTGTCTATAGGCAATGCTTTGAATATGCCTGTTGCTGAGAGAGAAAAACGACACCGACATAACTTCATGCATGTGACCACCCACACTGCACAAGAATGGGCAGAAACCTTCGTAAGTGAATTGAATGATACCGTTGTCGAAGCTCAATTAAGGATAAAGCAAGTTCCACCTCCACTTCCAGACAAAGAAGCTGTTGAACGTTTTCTGCAGTCTAAGAATCGATTGCTCATACTGGGATTCAATGCAACATTAACTGAACCGGTGGACACACCTGGGAGAAGAGGGGGTGATCAAATTAAAGAGATGGAGCTCAAATTGCACCCAGATTTAAAAGAACCCTTGAAAATTCTTGGCAATGATCCAAAGACAACAGTTGTTGTCCTCAGTGGAAGTGACAGAAGTGTCTTAGACGATAACTTCGGAGAACACAACATGTGGTTGGTAGCAGAAAATGGAATGTTTTTGCGTCTTACAAATGGTGAATGGATGACAACGATGCCAGAACATCTAAACATGGACTGGGTTGACAGTGTGAAGCATGTTTTTGAGTATTTCACAGAAAGAACACCTCGATCTCATTTTGAACTTCGTGAGACATCACTTGTATGGAATTACAAGTATGCAGATGTTGAATTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATCTGTGGACTGGCCCAATTTCGAATGCAGCTGTTGATGTTGTACAAGGGAGCCGGTCAGTTGAGGTTCGATCAGTTGGTGTTACAAAGGGTGCAGCAATTGATCGTATCTTGGGAGAAATTGTTCATAGCAAATGCATAGTGACACCAATTGATTATGTCCTATGCATTGGGCACTTTCTAGGGAAGGATGAAGATGTCTATGCATTTTTTGAACCAGAGCTTCCTGCTGAACCGGCATCTACTTCAAGAGCCAAGTTAGCTGATGCAGTCAAGACATCTATAGAGAAACGATCCGCATTGAAGCTGACACCCAGTAAAAGTGGGTCCAAACCATCTCACAGTAGGTCACAAAAGACCTCTATGAACCTGGAGAAGAAAACAACCAACCACAGCAGTGGGAGTGGATGGCAATCTGTAGAGGAGAGTAACGCATGGCATGAAGGTTCATCAGTGCTCGATCTCAAGGGAGAAAATTACTTCTCTTGTGCTGTTGGACGGAAGCGCTCCAATGCGCGGTATCTCCTAAATTCAACGGATGACGTCGTTAAATTTCTGAAGGAGTTGGCGGCAGCATCATCAAGTTAA 2805 0.441 MPGNNNNCNPAVPTTRLERLLRERELRKFNRTFHPNEEVSDGNREPDLFEHELSLNDGNNWEIPHEEEILEAAAATRALSEGYGRQDGRPSKQRLLVVANRLPVSAVRKGENSWSLEISAGGLVTALLGVKEFEAKWIGWAGVNVPDEIGQRALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLLHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNSEMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPRVQDHIKELKRRFADRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVALSIGNALNMPVAEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPPLPDKEAVERFLQSKNRLLILGFNATLTEPVDTPGRRGGDQIKEMELKLHPDLKEPLKILGNDPKTTVVVLSGSDRSVLDDNFGEHNMWLVAENGMFLRLTNGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRSVGVTKGAAIDRILGEIVHSKCIVTPIDYVLCIGHFLGKDEDVYAFFEPELPAEPASTSRAKLADAVKTSIEKRSALKLTPSKSGSKPSHSRSQKTSMNLEKKTTNHSSGSGWQSVEESNAWHEGSSVLDLKGENYFSCAVGRKRSNARYLLNSTDDVVKFLKELAAASSS* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01013 934 Gene3D Glycogen Phosphorylase B; 341 543 - -
Eupl02g01013 934 MobiDBLite consensus disorder prediction 840 880 - -
Eupl02g01013 934 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Eupl02g01013 934 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 86 340 - -
Eupl02g01013 934 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 685 765 - -
Eupl02g01013 934 Gene3D - 685 765 - -
Eupl02g01013 934 FunFam Alpha,alpha-trehalose-phosphate synthase 619 689 - -
Eupl02g01013 934 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 86 930 IPR001830 GO:0003824|GO:0005992
Eupl02g01013 934 SUPERFAMILY HAD-like 591 929 IPR036412 -
Eupl02g01013 934 Gene3D - 619 779 IPR023214 -
Eupl02g01013 934 CDD HAD_TPP 592 829 - -
Eupl02g01013 934 Gene3D Glycogen Phosphorylase B; 86 340 - -
Eupl02g01013 934 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 341 543 - -
Eupl02g01013 934 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
Eupl02g01013 934 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Eupl02g01013 934 Pfam Trehalose-phosphatase 618 814 IPR003337 GO:0003824|GO:0005992
Eupl02g01013 934 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01013 Eupl-Chr2 14949521 15017627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01013 1 934 Trehalose Biosynthesis Gene Families AT1G78580 77.044 0.0 1470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01013 K16055 - nnu:104608984 1619.75