Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01002 ATGGAAGCAAAGACGACTGCGAGGTTTACTCTGGGTAAGCAATCATCGCTTGCGCCGGAATGCGAGGTTGGAGCGGGAGTCGTTGATGAACTGGAAGTTCCGAAAGATCTTGATCCAACAGTTCGGCTCATGTATCTAGCCAACGAAGGTGATCTGGAAGGGATCAATGAGCTCTTGGATTCAGGAACCGACGTGAATTTCAGGGACATTGATGGACGGACCGCTCTGCATATCGCTGCTTGCCAGAGCCGGACGGATGTTGTTGAATTGCTGCTCCAGAGGGGCGCTCGGGTTGATCGGAAAGACCGGTGGGGTAGTACGCCTCTTGCAGATGCAATATATTACAAAAACCATGATGTGATCAAGCTTTTGGAGAAACATGGTGCAAAGCCTCTGATGGCTCCCATGCACGTCCAAAATGCCCGTGAAGTCCCAGAATATGAGATTGATCCTACCGAGCTTGACTTTACTAACAGCGTTGACATAACTAAGGGAACCTTTCGTATTGCAACATGGCGTGGAATTCAAGTTGCTGTTAAAAAGCTTGAGGATGACGTGATTACTGATGAGGATAAAGTAAGGGCTTTTAGGGATGAGCTTGCATTGCTTCAGAAGATACGGCATCCAAATGTAGTCCAGTTTTTGGGTGCTGTAACTCAAAGTAGTCCAATGATGATTGTCACCGAATATTTACCAAAGGGTGATCTTTGTGCATTCTTGAAAAGAAAAGGAGCATTAAAGCCAACAGCGGCAGTGAAATTTGCGCTTGATATTGCAAGGGGAATGAATTACTTGCACGAGCATAAGCCTGAAGCAATAATTCATCGTGATCTTGAGCCTTCAAATATACTGCGGGATGATTCCGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGCTGCTGAAAGTTGCAAATACAGTTAGAGAAGATAGACCTCTAACATGTCAAGATAGTTCTTGCCGGTATGTGGCTCCAGAGGTTTTTAGAAATGAAGAATATGATACAAAAGTGGATGTTTTTTCATTTGCTTTAATTCTACAAGAGATGATTGAAGGCTGCCCACCATTTTCTACAAAACAAGAATATGAAGTTCCTAAAGCATATGTGACAAAAGAGCGCCCATCTTTCAGAGCTCCCATAAAGCTTTACTCACATGGATTGAAAGAGTTGATTCAGGAATGCTGGAGTGAGAAGCCAGCCAGGAGACCAACATTCCGAGAAATAATTGAAAGGCTGGATGCCATTAATAATCATGTTAGTCATAAGAAGCGTTGGAAGGTCAGACCGCTAAAATGCTTTGAGAACCTTGAGGCCATGTGGAAGAAAGAGCATTCTGAGCCAAGATCCCGTTCATCCCGTTCATCCCGTTCATCTCGTTCTTCCAACACTGGATGA 1398 0.4442 MEAKTTARFTLGKQSSLAPECEVGAGVVDELEVPKDLDPTVRLMYLANEGDLEGINELLDSGTDVNFRDIDGRTALHIAACQSRTDVVELLLQRGARVDRKDRWGSTPLADAIYYKNHDVIKLLEKHGAKPLMAPMHVQNAREVPEYEIDPTELDFTNSVDITKGTFRIATWRGIQVAVKKLEDDVITDEDKVRAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCAFLKRKGALKPTAAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVANTVREDRPLTCQDSSCRYVAPEVFRNEEYDTKVDVFSFALILQEMIEGCPPFSTKQEYEVPKAYVTKERPSFRAPIKLYSHGLKELIQECWSEKPARRPTFREIIERLDAINNHVSHKKRWKVRPLKCFENLEAMWKKEHSEPRSRSSRSSRSSRSSNTG* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01002 465 FunFam Os01g0748600 protein 142 433 - -
Eupl02g01002 465 SMART ANK_2a 71 100 IPR002110 GO:0005515
Eupl02g01002 465 SMART ANK_2a 37 67 IPR002110 GO:0005515
Eupl02g01002 465 SMART ANK_2a 104 133 IPR002110 GO:0005515
Eupl02g01002 465 Gene3D Transferase(Phosphotransferase) domain 1 232 463 - -
Eupl02g01002 465 Pfam Protein tyrosine and serine/threonine kinase 163 413 IPR001245 GO:0004672|GO:0006468
Eupl02g01002 465 MobiDBLite consensus disorder prediction 442 465 - -
Eupl02g01002 465 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Eupl02g01002 465 Coils Coil 179 199 - -
Eupl02g01002 465 SUPERFAMILY Ankyrin repeat 37 133 IPR036770 -
Eupl02g01002 465 SUPERFAMILY Protein kinase-like (PK-like) 165 413 IPR011009 -
Eupl02g01002 465 Gene3D - 29 146 IPR036770 -
Eupl02g01002 465 ProSiteProfiles Protein kinase domain profile. 121 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g01002 465 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Eupl02g01002 465 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Eupl02g01002 465 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 122 420 - -
Eupl02g01002 465 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Eupl02g01002 465 PIRSF ILK 1 437 - -
Eupl02g01002 465 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Eupl02g01002 465 FunFam Integrin-linked protein kinase family 25 147 - -
Eupl02g01002 465 CDD STKc_MAP3K-like 170 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01002 Eupl-Chr2 14675247 14723446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01002 8 434 MAP Kinase Kinase Kinase AT4G18950 69.302 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Eupl02g01002 PK_Tyr_Ser-Thr 3.3e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01002 - - nnu:104608992 763.066