Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01000 ATGCAAATGACCAGTATGGATTCTGCAAATTCAGATTTTGCAAAAGCAGAAGAAATCAAACTCCTCGCTAATGAAGCATTTAAAGCTCACAAGTATTCTCAAGCTATTGATCTGTATACTCAAGCCATTGAACTGAATAGCCAGAATGCTGTATACTGGGCAAATCGGGCACTTGCCCACACTAAACTGGAGGAGTATGGGAGTGCTATACAGGATGCGACAAAGGCTATAGAAGTTGATCCTAAATATTCGAAGGGCTATTATAGAAGAGGTGCAGCATATCTTGGAATGGGAAAATTTAAGGATGCTTTGAAAGATTTTCAGCAGGTCAAGAAAATCTGTCCAAACGATCCTGATGCGGCTAAGAAGTTGAAGGAATGTGAGAAAGCTGTAATGAAGCTTAGATTTGAAGAAGCTATTGCTGTACATGACGCTGAAAGACATTCAATAGCTGATTCTATTGATTTTCATACCGTAGAAGTGGAGTCACAATACGTTGGTGCGAGGATAGAGGGAGAAGTCGTAACCTTAGATTTTGTGAAGAAAATGTTGGATGACTTTAAAAATCAGAAATGCTTACACAAACGATATGCATTCCAGATGGTATTACAAACAAGAGAAATGCTGCGTGCCCTGCCATCTCTGGTGGATATAACCGTACCAGATGGAAAGCATTTCACTGTTTGTGGTGATGTACATGGCCAGTTCTATGATCTATTGAATATATTTGAGCTCAATGGGCTTCCCTCAGAAGAGAACCCGTATCTGTTTAATGGTGATTTTGTGGATAGGGGATCCTTCTCTCTTGAGATCATTCTCACACTATTTGCATTTAAGTGCATGTCTCCATCAGCTATTTATCTATCTAGAGGAAATCACGAGAGTAAGAGCATGAACAAGATATATGGTTTTGAAGGCGAGGTCAAGTCAAAGTTGAGTGACACATTTGTTGAACTCTTTGCCGAAGTATTTTGTTGTTTACCTTTGGCACATGTCATAAATGGAAAGGTCTTTGTAGTTCATGGAGGTCTTTTCAGTGTTGATGGGGTGAAACTCTCTGACATTAGAGCAATTGATCGGTTTTGTGAGCCTCCTGAGGAAGGTTTGATGTGTGAATTGCTATGGAGTGATCCACAACCTTTTCCTGGAAGAGGTCCCAGCAAGCGAGGTGTAGGTCTTTCTTTTGGTGGAGATGTGACAAAGAGATTTTTGCAAGAGAATAGTCTTGATCTAGTTGTGCGATCCCATGAAGTGAAGGATGAAGGATATGAGATTGAGCATGATGGTAAACTTATTACTGTATTTTCTGCTCCAAATTATTGTGATCAGATGGGTAACAAGGGTGCTTTCATACGGTTCGAAGCCCCTGATATGAAGCCAAACATCGTTACATTTTCTGCTGTGCCACACCCGGATGTCAAGCCAATGGCATATGCCAACAATTTCCTCCGTATGTTCTCTTGA 1464 0.4064 MQMTSMDSANSDFAKAEEIKLLANEAFKAHKYSQAIDLYTQAIELNSQNAVYWANRALAHTKLEEYGSAIQDATKAIEVDPKYSKGYYRRGAAYLGMGKFKDALKDFQQVKKICPNDPDAAKKLKECEKAVMKLRFEEAIAVHDAERHSIADSIDFHTVEVESQYVGARIEGEVVTLDFVKKMLDDFKNQKCLHKRYAFQMVLQTREMLRALPSLVDITVPDGKHFTVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSLEIILTLFAFKCMSPSAIYLSRGNHESKSMNKIYGFEGEVKSKLSDTFVELFAEVFCCLPLAHVINGKVFVVHGGLFSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPFPGRGPSKRGVGLSFGGDVTKRFLQENSLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMFS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01000 487 Pfam Tetratricopeptide repeat 85 117 IPR001440 GO:0005515
Eupl02g01000 487 ProSiteProfiles TPR repeat profile. 84 117 IPR019734 GO:0005515
Eupl02g01000 487 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 48 480 - -
Eupl02g01000 487 ProSiteProfiles TPR repeat profile. 50 83 IPR019734 GO:0005515
Eupl02g01000 487 Pfam Tetratricopeptide repeat 22 83 - -
Eupl02g01000 487 PIRSF PPPtase_5 3 487 - -
Eupl02g01000 487 Gene3D - 144 486 IPR029052 -
Eupl02g01000 487 Gene3D Tetratricopeptide repeat domain 1 143 IPR011990 GO:0005515
Eupl02g01000 487 ProSiteProfiles TPR repeat profile. 16 49 IPR019734 GO:0005515
Eupl02g01000 487 CDD MPP_PP5_C 165 480 IPR041753 -
Eupl02g01000 487 SUPERFAMILY TPR-like 14 143 IPR011990 GO:0005515
Eupl02g01000 487 SUPERFAMILY Metallo-dependent phosphatases 175 481 IPR029052 -
Eupl02g01000 487 FunFam Serine/threonine-protein phosphatase 5 144 486 - -
Eupl02g01000 487 SMART pp2a_7 193 469 IPR006186 GO:0016787
Eupl02g01000 487 Pfam Calcineurin-like phosphoesterase 225 419 IPR004843 GO:0016787
Eupl02g01000 487 FunFam Serine/threonine-protein phosphatase 5 6 143 - -
Eupl02g01000 487 SMART tpr_5 84 117 IPR019734 GO:0005515
Eupl02g01000 487 SMART tpr_5 50 83 IPR019734 GO:0005515
Eupl02g01000 487 SMART tpr_5 16 49 IPR019734 GO:0005515
Eupl02g01000 487 Pfam PPP5 TPR repeat region 124 217 IPR013235 -
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 255 282 IPR006186 GO:0016787
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 288 312 IPR006186 GO:0016787
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 225 252 IPR006186 GO:0016787
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 408 428 IPR006186 GO:0016787
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 352 379 IPR006186 GO:0016787
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 430 446 IPR006186 GO:0016787
Eupl02g01000 487 PRINTS Serine/threonine phosphatase family signature 322 348 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01000 Eupl-Chr2 14605856 14637128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01000 225 409 Calmodulin-binding Proteins AT5G63870 36.986 5.32e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01000 K04460 - aew:130790041 902.123