Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl02g00999 | ATGGCTTTCTTCAAGTTCTTCAGATTCAACATTATCAGATGGAAATCCAAACGGGTTCAGGATTTGGAGGAGCCTGGGTTGAGCAAGACTGACCTTCTTGATCGTCCACTGAGGAAATTCAGTCGGGAGGAGATAGAGAAGCTCACCATGAATTTCTCACGTGTGATTGGTGAAGGAGGGTTCAGCACTGTTTATCTTGCTTACTTCTCAAAATCAACCCTCGGAGCTCTCAAGATACATAGGAACAGTGAGCGTCTAAACCGAATCTTCAAACAAGAACTGGAAGTCCTGCTTCATGTCCGACACGACAACATCGTCAAGCTTCTTGGTTACTGTGATGAAGAACGCGCTTTGGTGTTTGAATATGTTTCCAATGGTACTTTACATGAGAAACTCCATGATCGAATTGTTCTTCCTTGGAAGACCCGCATGTCTATTGCGTTTCAACTGGCTAGAGCGGTTGAATACCTTCATGACCACTGTACTCTCCATATCGTTCATGGTGATATTAAAGCTTCAAATGTGCTCCTCGATGAGCAACTCAACTGTAAGCTCTGTGATTTCGGGTTTGCTAAGATGGGTTTTTCTTCCACAATTCTGCCGTCATCGATGAATACGATAATGGGTTCCGCTGGTTATGTTGATCCACATTACATGAAGACGGGAATCGCTTCGAAAAAGAACGACGTTTACAGCTTTGGTGTGATAGTTTTGGAGCTGATCACGGGAATGGAGGCCTTCTGCTCGGAAAAAGAGCAGCTTTTGACGTCAATAGTGAGGCCAAGACTGGGCGACGCGAATAAGGTAGCGGAAATGGTAGATCCTCGACTGGTGGGAGATTTTAATGTCGATGAAGTGATAGTCATGGCTTCCATATCCGCACTTTGCCTTCAAGAACATCCTAGTTTCAGGCCTTCCATGGCGGAGATCTTGCGAACCATGAGAGAGAAGATCTCGTCCGTCTCAGTTGTTGCTGCTGAAATATTCAAGGATACAACTACAGTGAAGAGACAACAACGTTCCTAA | 1026 | 0.4483 | MAFFKFFRFNIIRWKSKRVQDLEEPGLSKTDLLDRPLRKFSREEIEKLTMNFSRVIGEGGFSTVYLAYFSKSTLGALKIHRNSERLNRIFKQELEVLLHVRHDNIVKLLGYCDEERALVFEYVSNGTLHEKLHDRIVLPWKTRMSIAFQLARAVEYLHDHCTLHIVHGDIKASNVLLDEQLNCKLCDFGFAKMGFSSTILPSSMNTIMGSAGYVDPHYMKTGIASKKNDVYSFGVIVLELITGMEAFCSEKEQLLTSIVRPRLGDANKVAEMVDPRLVGDFNVDEVIVMASISALCLQEHPSFRPSMAEILRTMREKISSVSVVAAEIFKDTTTVKRQQRS* | 342 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl02g00999 | 341 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 123 | 327 | - | - | |
| Eupl02g00999 | 341 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 313 | IPR011009 | - | |
| Eupl02g00999 | 341 | Gene3D | Transferase(Phosphotransferase) domain 1 | 123 | 335 | - | - | |
| Eupl02g00999 | 341 | Pfam | Protein kinase domain | 52 | 312 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Eupl02g00999 | 341 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 122 | - | - | |
| Eupl02g00999 | 341 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672|GO:0006468 | |
| Eupl02g00999 | 341 | PANTHER | OS01G0253100 PROTEIN | 32 | 317 | - | - | |
| Eupl02g00999 | 341 | ProSiteProfiles | Protein kinase domain profile. | 50 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Eupl02g00999 | 341 | SMART | serkin_6 | 50 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Eupl02g00999 | Eupl-Chr2 | 14602608 | 14604037 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl02g00999 | 40 | 325 | Receptor kinase-like Gene Family | AT1G33260 | 47.588 | 1.92e-97 | 290 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_RLCK-XIII | Eupl02g00999 | Pkinase | 1.9e-43 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl02g00999 | - | - | nnu:104592951 | 445.277 |