Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00992 ATGTGGTTGGGAGAGATACCAGTCGAATTTAGATTCCAACCTAGTGACGTGGAGCTAATCTTCCATTACCTAGAAAACAAAATCAATGGTCAAGACCTCTCTTCGACAGCAGTCACGGAAGCCGACGTGTACGGCGCTGAACCATGGCTTCTACCAGGAGCTAATAATAATGGAGTTGATGGTGGAGAGATGCAAAGTCTTGACTTCTTTGCCACGATGAAAAGGAAAACAGAGAATGGATTGAGACTCGAGCGTAGAGCTGATAATGGTTTCTGGAAAGCAACTTCCGGGGATATGTTGATAAAAAATGGAGGAAGCCAGGTTGGTGTCATGAAATCATTAGTTTATCACTGCTACAAGAGTGGTAACCAAACCACCAATAATGGCAAGAAGACGAAATGGATAATGCGCTAG 414 0.4372 MWLGEIPVEFRFQPSDVELIFHYLENKINGQDLSSTAVTEADVYGAEPWLLPGANNNGVDGGEMQSLDFFATMKRKTENGLRLERRADNGFWKATSGDMLIKNGGSQVGVMKSLVYHCYKSGNQTTNNGKKTKWIMR* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00992 137 SUPERFAMILY NAC domain 5 136 IPR036093 GO:0003677|GO:0006355
Eupl02g00992 137 Gene3D NAC domain 15 137 IPR036093 GO:0003677|GO:0006355
Eupl02g00992 137 PANTHER NAC TRANSCRIPTION FACTOR 56 6 136 - -
Eupl02g00992 137 ProSiteProfiles NAC domain profile. 6 137 IPR003441 GO:0003677|GO:0006355
Eupl02g00992 137 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00992 Eupl-Chr2 14525661 14526166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00992 1 136 NAC Transcription Factor Family AT1G33060 39.706 8.15e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl02g00992 NAM 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00992 - - ming:122060766 103.219