Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00991 ATGGCGATACCGTACGCCTCATTTTCCGCCCTTGTCTCTATTCCGTCTCCGAAAACTTCCTTCGCCTCAGTAAAGAACCCTTTTCTTGGATTTTCAGTCACAGCAGCGAAACCTTCTCTCCGAACACCTACTTTGGCAAAGCAGACGTTCCAGATTCGGTCCCAAGACCTCTCTGTGGTCCCCATAGAGCAGCGCTGGATGTTCGATGATTCTGAGATTAACGGACCTGACATTTGGAATAAGACTTGGTATCCTAAGGCTTCAGATCATGTAAACACAGAGAAAACATGGTATGTAGTTGATGCAACTGACAAAATTCTGGGAAGACTAGCATCCACTATTGCCATTCATATCCGTGGAAAAAATTTAGCAACCTATACTCCTAGTGTGGACATGGGAGCATTTGTTATCGTGGTAAATGCAGAAAAAGTTGCTGTATCTGGAAAGAAAAGGTTGCAAAAGCTGTATAGGCGGCATTCAGGAAGACCAGGTGGTATGACGGTGGAGACATTCGATCAGCTACAGCAGAGAATTCCAGAAAGAATAATTGAACATGCTGTCCGTGGCATGCTTCCAAAAGGGAGGCTGGGTAGGGCTCTCTTTAATCATCTCAAGGTATACAAGGGGCCGGACCACCCGCATGAGGCCCAACAGCCCATTGATCTGCCCATAAGGGACAAGAGGATACAGGCTCCAATTGGTAAATGGAAAATTTTACTCAAATCTACAAACGTCTTTTCTTTGCTGCACATTTTGGGATTCTGGTTGGGAAGATGA 777 0.4543 MAIPYASFSALVSIPSPKTSFASVKNPFLGFSVTAAKPSLRTPTLAKQTFQIRSQDLSVVPIEQRWMFDDSEINGPDIWNKTWYPKASDHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRLQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQQPIDLPIRDKRIQAPIGKWKILLKSTNVFSLLHILGFWLGR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00991 258 CDD Ribosomal_L13 97 210 IPR005822 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 PANTHER RIBOSOMAL PROTEIN L13 83 236 IPR005822 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 FunFam 50S ribosomal protein L13 80 224 - -
Eupl02g00991 258 ProSitePatterns Ribosomal protein L13 signature. 187 209 IPR023563 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 Pfam Ribosomal protein L13 95 213 IPR005822 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 Gene3D Ribosomal protein L13 86 229 IPR036899 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 Hamap 50S ribosomal protein L13 [rplM]. 97 221 IPR005822 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 SUPERFAMILY Ribosomal protein L13 92 224 IPR036899 GO:0003735|GO:0005840|GO:0006412
Eupl02g00991 258 NCBIfam 50S ribosomal protein L13 91 222 IPR005823 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00991 99 231 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 32.353 1.08e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00991 K02871 - vvi:100248623 373.629