Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00990 ATGGCAGTTTTTGTTAGTCCTAATATAAATTGGGCATACAGTAGTACGGGAAAGTTCATCGGACCTGGTGGTGGTCCCCTGGATTATGTACAGAACAGAACATGTGGGATTTCCATGGTTGATGCACCTTTGTATACGACAGCACGCCTTTCTCCTCTGTCCCTCAAGTACTATGGACTCTGTCTAATTAATGGCAACTATACAGTGAAGCTTCATTTTGCTGAAATAATATTTACCGAATATGAAGGCAATTATGGCATCAAGGGGAAACGTATGTTTGATGTGTTTATTCAGGGTGAGAAGGTGCTAAAGGATTTCAATATCAAAGAAGAAGCTAGAGGCTCAAATAAAGCAGTTGTTAAGAATTTTTCTGCTGATGTGAGAAACCACCTTTTAGAGATCCACTTATACTGGGCTGGTCAGGGTTCTATATATATCCTGCCAGGACTTTACGGTCCTCTTATTTCAGCTATTTCAGTAACTCCTGGTAGAGTTTTCCGAAAAGGTTCAGCCGTAAAGCTATCTGCTATAAGCATAGCTGGGATTGTGGGATCTGCAGTCCTTTTCATCATCCTTGTTTTGGTTTTCCTTTGGAAAATGGGTTGGCTAGGAGGCAAAGAATTGCGTGATGAAGAACGCAAAGTACTTGAGCTATTCCCCGGCGGATGGTTCAACTTTCGGCAGATAAAAGCTGCTACTCAAAATTTTGATTCTGCAAATAAGATTGGTGAAGGGGGTTTTGGGATAGTTTACAAGGGTGTACTACCAAATGGGATGGCAATAGCCGTGAAACAGCTTTCATCAAAATCAAAGCAAGGAATTCGGGAGTTTGTGAATGAAGTAGGCACAATTTCTGCTTTGCAACACCCAAATCTCGTTAGACTGTTGGGATGTTGTACTGAGGACAACCAACTCCTACTAGTATATGAATACATGGAAAATAATTCCCTTTCAAGTGCTTTATTTGGTCCTGGGGATATAAAGTCAAGACTTAATTGGCCAACCAGAGTTAAGATTTGCCTTGGAATAGCAAAGGGTCTTGCTTTTCTCCATGAAGAGTCAAAACTGAAGATTGTCCACAGGGATATTAAACCCACCAATGTTCTGCTTGATAAAGATCTCAATGCGAAGATCTCTGATTTTGGAATGGCTAAGCTTTATGAAGGAGAAAACACACACATCATCACCAAAATAGCAGGAACAACATAA 1209 0.4061 MAVFVSPNINWAYSSTGKFIGPGGGPLDYVQNRTCGISMVDAPLYTTARLSPLSLKYYGLCLINGNYTVKLHFAEIIFTEYEGNYGIKGKRMFDVFIQGEKVLKDFNIKEEARGSNKAVVKNFSADVRNHLLEIHLYWAGQGSIYILPGLYGPLISAISVTPGRVFRKGSAVKLSAISIAGIVGSAVLFIILVLVFLWKMGWLGGKELRDEERKVLELFPGGWFNFRQIKAATQNFDSANKIGEGGFGIVYKGVLPNGMAIAVKQLSSKSKQGIREFVNEVGTISALQHPNLVRLLGCCTEDNQLLLVYEYMENNSLSSALFGPGDIKSRLNWPTRVKICLGIAKGLAFLHEESKLKIVHRDIKPTNVLLDKDLNAKISDFGMAKLYEGENTHIITKIAGTT* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00990 402 Gene3D - 5 165 - -
Eupl02g00990 402 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 205 311 - -
Eupl02g00990 402 SUPERFAMILY Protein kinase-like (PK-like) 218 401 IPR011009 -
Eupl02g00990 402 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
Eupl02g00990 402 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 401 - -
Eupl02g00990 402 Gene3D Transferase(Phosphotransferase) domain 1 312 402 - -
Eupl02g00990 402 SMART serkin_6 236 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00990 402 Pfam Protein kinase domain 238 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00990 402 Gene3D Phosphorylase Kinase; domain 1 206 311 - -
Eupl02g00990 402 Pfam Malectin domain 38 158 IPR021720 -
Eupl02g00990 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Eupl02g00990 402 FunFam Os07g0541700 protein 312 401 - -
Eupl02g00990 402 ProSiteProfiles Protein kinase domain profile. 236 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00990 Eupl-Chr2 14464474 14466150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00990 8 401 Receptor kinase-like Gene Family AT1G07650 56.250 2.23e-137 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g00990 Pkinase 3.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00990 - - hbr:110661135 517.309