Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00988 ATGATGATTTTTTCTCTCAAAACAGAACTCAAAGCACTTGAGCTATTCCCCGGCGGATGGTTCAACTTTCGGCAGATAAAAGCTGCTACTCATAATTTTGATCCTGCAAATAAGATTGGTGAAGGGGGTTTTGGCTCAGTTTACAAGGGTGTACTACCAAATGGGATGGCAATAGCGGTGAAGCAGCTTTCATCAAAATCAAAGCAAGGAATTCGGGAGTTTGTAAATGAAGTAGGCACTATTTCTGCTTTGCAGCACCCAAATCTCGTTAGACTGTTGGGATGTTGTACTGAGGACAACCAACTCCTACTAGTATATGAGTACATGGAAAATAATTCCCTTGCAAGTGCTTTGTTTGGTCCTGGGGATATAAAGTCGAGACTTAATTGGCCAACCAGAGTGAAGATTTGCCTTGGAATAGCAAAGGGTCTTGCTTTTCTCCATGAAGAATCAAAACTGAAGATTGTCCACAGGGACATTAAACCCACCAATGTTCTGCTTGATAACGATCTCAATGCGAAGATATCTGATTTTGGAATGGCTAAGCTTTATGAAGGAGAAAACACGCACATCATCACCAAAATAGCAGGAACAACTGGGTATATGGCCCCTGAGTATGCCATGCGGGGTTACTTAACCAACAAAGCAGATGTTTACAGCTTTGGAGTTGTCACACTTGAAATTTTGAGTGGAAAAAACAGTTCAGATTACAGGCCGAGTGAGGAGACTGTTTTCCTTCTAGATTTGGCCTATGTCTTACAACAGAAGGGAAATCTTCTAGCACTGATTGATCCAGTCTTGGGGATGAACTACTCAGTGAAAGAAGCAACAAGGGTGTTGGATTTGGCAATGCTATGTACCAATACTTCCCCTACACTCAGGCCTATCATGTCTGAAGTGGTGAGCATTCTCGAAGGAAAGACTAAGATGAAGGCCCTTCCCCACCATGCACCATACTCGACAGATGATTTTGTTATGGCCAAGGCCATGGCTGACCTTTCTCTGTCCACTAACTCTGGCAGCGGTTCCACAGAAGGGACATCAAACGCCTTTTCTTCTTCTGTGAAGAACAATGAAGGAAAAGAGCAGCACGATGAATCTATGCAGATTACCCCAGATGACATCTCAGACGAGACTGCAGACTTGCAAAATTAG 1155 0.432 MMIFSLKTELKALELFPGGWFNFRQIKAATHNFDPANKIGEGGFGSVYKGVLPNGMAIAVKQLSSKSKQGIREFVNEVGTISALQHPNLVRLLGCCTEDNQLLLVYEYMENNSLASALFGPGDIKSRLNWPTRVKICLGIAKGLAFLHEESKLKIVHRDIKPTNVLLDNDLNAKISDFGMAKLYEGENTHIITKIAGTTGYMAPEYAMRGYLTNKADVYSFGVVTLEILSGKNSSDYRPSEETVFLLDLAYVLQQKGNLLALIDPVLGMNYSVKEATRVLDLAMLCTNTSPTLRPIMSEVVSILEGKTKMKALPHHAPYSTDDFVMAKAMADLSLSTNSGSGSTEGTSNAFSSSVKNNEGKEQHDESMQITPDDISDETADLQN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00988 384 MobiDBLite consensus disorder prediction 337 384 - -
Eupl02g00988 384 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 3 108 - -
Eupl02g00988 384 CDD STKc_IRAK 39 306 - -
Eupl02g00988 384 Pfam Protein tyrosine and serine/threonine kinase 37 304 IPR001245 GO:0004672|GO:0006468
Eupl02g00988 384 Gene3D Transferase(Phosphotransferase) domain 1 109 322 - -
Eupl02g00988 384 ProSiteProfiles Protein kinase domain profile. 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00988 384 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 331 - -
Eupl02g00988 384 MobiDBLite consensus disorder prediction 337 357 - -
Eupl02g00988 384 ProSitePatterns Protein kinases ATP-binding region signature. 39 61 IPR017441 GO:0005524
Eupl02g00988 384 Gene3D Phosphorylase Kinase; domain 1 7 108 - -
Eupl02g00988 384 FunFam Putative LRR receptor-like serine/threonine-protein kinase 109 315 - -
Eupl02g00988 384 SUPERFAMILY Protein kinase-like (PK-like) 16 305 IPR011009 -
Eupl02g00988 384 SMART serkin_6 33 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00988 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00988 Eupl-Chr2 14291267 14292917 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00988 9 311 Receptor kinase-like Gene Family AT1G53430 71.947 2.56e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g00988 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00988 - - hbr:110661135 548.51