Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00973 ATGCACGCCGGACGGTTTTTTATCGTTTGGGTTCTCGGGTTCACTTGCTTCTTAACTTCTGCCTTCGGAGCGACTCTTCTGCCCGACTATGAAGTGGAGGCTTTAAGAGAAATAGCGAAGACGTTGGGGAAGACGAACTGGAACTTCAGCGCAGATCCATGCAGCGGAGAGTGGGGATGGACGACGCCAAATCCGGTAAAAGGATTAGAGAATGCCGTTACCTGCAACTGCTCCTTCGCTAACGGCACCGTTTGCCACGTCGTCAGCATAGTGCTCAAAGCGCAGAGTCTACCAGGCGTCCTTCCACCAGAACTGATCAAGCTCCCTAATCTCCAGGAAATTGATCTCACACGCAACTACCTTAACGGTACAATACCACCAGAATGGGGTTCCATGAAATTGGTGAATGTCTCCCTTCTCGGAAACCGATTATGGGGTCCATTACCGAAAGAACTCGGAAATATCAGCACTCTCATAAGTCTGACCCTGGAGTACAATCATCTCTCTGGAGTTCTTCCTCCGGAGCTTGGAGAACTGGTCAACATAGAGAGAATACTAGTTTCCTCGAACAATTTTACCGGGGAGTTGCCGGAGATACTTGCTAAGCTCACCAACATGAAGGACTTTCGGATAAGCGATAATCACTTTACTGGGAAGATACCCAATTTTATACAGAACTGGACCAAGCTTGAAAAACTAGCAATACAAGCAAGCGGTTTGGAAGGACCCATTCCTTCTGGCATTTTTCTTTTGGAAAAATTATCCGACATGAGGATTAGTGACATAAATGGAACGGGAGCCGCTTTACCGCCACTGAGTAACATGAAAAGCATGAAAACACTGATATTGAGGAGTTGCAATATTATTGGTGGAATACCTGCATATATAGGGGAGATGACAAAACTGAAAACCTTAGACCTCAGCTTTAACAAGCTAATAGGACAAATTCCAAGCAGCTTTGACAGTCTATCAAAAGTGGATTTCATGTACTTGACTGGCAATTTGCTAACTGGGCTTGTACGTGATTGGATGCTGAAGAAAGGAGAAAGCGTTGATCTCTCCTACAACAACTTTACATTGGAAAGCTCAGGGACACCTAGTTGTCAACAACGTAATGCAAACTTATTCGGAAGTGCTTTGTTGGGGAACAACTCTGGTGGAGTCGTTCCATGCTTGAAGAGCTTTCGTTGTCCACGGAATTGGCATTCATTCTATATAAATTGTGGTGGAAGAGAAGTTACTATCAACGGAAATACGACATATGAAGATGATCCAGACTCGGCTGGCTCTTCAAATTTTTTTCAAAGTAGATATAACTGGGCATTTAGCAGCACTGGTAACTTCATGGACAATGACAATGATAAGGACACCTATATAGCAACAAACATATCCAGACTCTTGATGAACAACTCCCAATTGTACACCACAGCACGCCTTTCTCCCCTTTCTCTCACTTATTATGGGTTCTGTCTGCTAAATGGGAACTACACTGTGGACCTCCACTTTGCGGAGATAATGTTTACAAATGACAAAACATATAGCAGCCTTGGGAGGCGCATATTTGATGTTTACATTCAGGGAAAATTAGTGCTGAAGGATTTTAATATCGAGGATGAAGCAGGTGGGGCTGGTAAGGCAGTCATAAAAAGTTTTACTGCAGTTGTGACAAGTAGCACTTTAGAGATCCGCTTCTTCTGGGCTGGGAAGGGGACAACAGGGATCCCTTCCAGAGGAACCTATGGTCCTCTTGTGTCAGCCATTTTTGTAGACTCTGATTTCGAACCTCCTTCAGAAGGTGAAAAGAAGATATCTGCTGCTGTTGTGGTCGGAATTGTGGCTTCAGTATTATGCCTTGTCTTCATGATTTTGGGTATCCTTTGGTGGAAAGGATGTCTAGGACGAAAACACACGATGGACGAAGATCTGAGAGGTCTGGACCTACAAACTGGTTCCTTCACCTTGAGGCAAATTAAAGCTGCTACAAACAACTTTGATGCTGCAAACAAGATTGGAGAAGGGGGGTTTGGACCTGTTTACAAGGGCCTTTTGTCGGATGGTACCATAATTGCAGTGAAACAGCTTTCTTCTAAATCAAAGCAAGGAAATCGTGAATTTGTGAACGAGATAGGAATGATTTCTGCTCTGCAACACCCACATCTTGTAAAACTATATGGATGTTGTATTGAAGGAAATCAATTATTGCTAATATATGAATACCTGGAAAATAACTGCCTTGCACGTGCATTGTTTGGTCCAGAAGAATGCCAGTTGAAATTGGATTGGTCGACCAGGCACAAGATATGTGTTGGTATAGCAAGAGGTCTGGCTTATCTTCACGAAGAATCAAGACTGAAGATTGTTCACAGAGACATCAAAGCTACCAATGTACTGCTCGATAAGGATCTTAACCCTAAGATATCTGACTTTGGTTTGGCCAAACTTAATGAAGAGGACAACACCCATATCAGCACTCGAATTGCTGGAACTTTTGGATATATGGCACCGGAGTATGCGATGCGAGGTTACCTGACTGACAAAGCAGATGTTTACAGTTTTGGAGTTGTTGCATTAGAAATTGTTAGTGGGAGGAGCAATACAAATTACAGGCCAAAAGCAGACACTGTTTATCTTCTTGATTGGGCATTGGTTTTGCAAGAGAAAGGAAGTTTAATGGAGTTGGTGGATCCAAGATTGGGATCTGAATACAACAAGGAAGAGGCTATGGGGATGATTAATGTGGCTCTCCTATGCACAAATACATCTCCAACACTTAGGCCTACAATGTCTGCTGCGGTGAGCATGCTCGAAGGTCGAACCGTAGTTCAGGAGTTTGTTTCGGATCCGAGTATCACCAGTGATGATGTGCAATTTAAGGCCATGAGGAACCATCATAAACAGAGCCATGATCAGAGCATGAGTGAAGGCCAGACCCAAAGTATGTCGAGAGACGGGCCGTGGACTGGGTCTTCCACTTCTGCTCCTGATCTTTACCCAGTCAATCTGGATTCCCAATATTGGAACAACAGAGAGTAG 3033 0.4385 MHAGRFFIVWVLGFTCFLTSAFGATLLPDYEVEALREIAKTLGKTNWNFSADPCSGEWGWTTPNPVKGLENAVTCNCSFANGTVCHVVSIVLKAQSLPGVLPPELIKLPNLQEIDLTRNYLNGTIPPEWGSMKLVNVSLLGNRLWGPLPKELGNISTLISLTLEYNHLSGVLPPELGELVNIERILVSSNNFTGELPEILAKLTNMKDFRISDNHFTGKIPNFIQNWTKLEKLAIQASGLEGPIPSGIFLLEKLSDMRISDINGTGAALPPLSNMKSMKTLILRSCNIIGGIPAYIGEMTKLKTLDLSFNKLIGQIPSSFDSLSKVDFMYLTGNLLTGLVRDWMLKKGESVDLSYNNFTLESSGTPSCQQRNANLFGSALLGNNSGGVVPCLKSFRCPRNWHSFYINCGGREVTINGNTTYEDDPDSAGSSNFFQSRYNWAFSSTGNFMDNDNDKDTYIATNISRLLMNNSQLYTTARLSPLSLTYYGFCLLNGNYTVDLHFAEIMFTNDKTYSSLGRRIFDVYIQGKLVLKDFNIEDEAGGAGKAVIKSFTAVVTSSTLEIRFFWAGKGTTGIPSRGTYGPLVSAIFVDSDFEPPSEGEKKISAAVVVGIVASVLCLVFMILGILWWKGCLGRKHTMDEDLRGLDLQTGSFTLRQIKAATNNFDAANKIGEGGFGPVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLIYEYLENNCLARALFGPEECQLKLDWSTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGTFGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGRSNTNYRPKADTVYLLDWALVLQEKGSLMELVDPRLGSEYNKEEAMGMINVALLCTNTSPTLRPTMSAAVSMLEGRTVVQEFVSDPSITSDDVQFKAMRNHHKQSHDQSMSEGQTQSMSRDGPWTGSSTSAPDLYPVNLDSQYWNNRE* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00973 1010 Gene3D Phosphorylase Kinase; domain 1 633 739 - -
Eupl02g00973 1010 Gene3D - 402 592 - -
Eupl02g00973 1010 Pfam Leucine rich repeat 277 336 IPR001611 GO:0005515
Eupl02g00973 1010 MobiDBLite consensus disorder prediction 971 1010 - -
Eupl02g00973 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Eupl02g00973 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 592 - -
Eupl02g00973 1010 SUPERFAMILY L domain-like 75 397 - -
Eupl02g00973 1010 SUPERFAMILY Protein kinase-like (PK-like) 648 960 IPR011009 -
Eupl02g00973 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 973 - -
Eupl02g00973 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 739 - -
Eupl02g00973 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Eupl02g00973 1010 Gene3D Ribonuclease Inhibitor 264 384 IPR032675 -
Eupl02g00973 1010 Pfam Protein tyrosine and serine/threonine kinase 667 934 IPR001245 GO:0004672|GO:0006468
Eupl02g00973 1010 Pfam Malectin domain 404 587 IPR021720 -
Eupl02g00973 1010 ProSiteProfiles Protein kinase domain profile. 664 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00973 1010 Gene3D Transferase(Phosphotransferase) domain 1 740 951 - -
Eupl02g00973 1010 MobiDBLite consensus disorder prediction 961 1010 - -
Eupl02g00973 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 31 190 - -
Eupl02g00973 1010 Gene3D Ribonuclease Inhibitor 28 263 IPR032675 -
Eupl02g00973 1010 SMART serkin_6 664 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00973 1010 FunFam Leucine-rich repeat transmembrane protein kinase 199 404 - -
Eupl02g00973 1010 CDD STKc_IRAK 670 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00973 Eupl-Chr2 13704487 13721925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00973 27 995 Receptor kinase-like Gene Family AT1G53420 55.453 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g00973 PK_Tyr_Ser-Thr 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00973 - - ming:122088669 1532.31