Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00972 ATGTTGGACAGGCGTGTTTTCCTTGTCCTGGTTCTTGCTTTCAGTTGCTTGGTCACGTTCCCATTCGCAGCAACTCTTGTGCCAGACGAAGTCGAAGCTTTAGAACAAATTGGGAGGTCATTGGGGAAGAATTGGAATTTCAACGAGGACCCTTGCAGCAATGACTCGAGTTGGACAACCCTTAATCTAAAAGGCGGATCTGACAATTCGGTAACTTGCAACTGCACCTTTGCTAACAACACCTGCCACATCGTTAAAATAGTGCTAAGAATGCAGAGTCTTCAAGGCATGCTTCCACCAGAACTGGTCAGGCTTCCCTACCTCCAAGAAATTGATCTCAACCGCAACTACCTTAACGGTACAATACCTCCACAATGGGGTTCCATGCAATTGGTGAACATCTCCCTTCTTGGAAACCGATTATCGGGTCCGATCCCAAAAGAATTCGGAAGCATCATCACTCTTAGAAATCTGGTACTGGAGGCCAACCAGCTCTCTGGAGTTCTTCCTCCAGAGCTTGGGAATATGGTCAACATAGAGAGAATACTCATTACCTCAAACAATTTCACTGGAGAGTTGCCAAAGACGCTGTCTAAGTTGTCGAAACTTAGGGACTTACGAATAAGCGCTAACCAGTTTACTGGGAAGATACCCAATTTTATCCAAGACTTGACAAAACTTAGGAGATTGGATATACAAGCAAGTGGCTTCGAAGGGCCAATTCCTTCTGGCATTTCTTATTTGCAAGAACTAACTGACTTGAGGTTTAGTGACATAATTGGGCCAGAATCACGCTTTCCACTGGTGAGCGGAATGACAAACTTGGAACAATTGATATTAAGGAGTTGTAATATTTCTGATACGCTTCCTGAATATCTTGGGGCAATGACATCACTGGAGACCTTAGACCTTAGCTTTAACAAGTTGACAGGAGAAATGCCAAGTAACTTTGAGGGCTTAATGTCAGAGGTGAAAACCATGTACTTAACTGGAAACTTGCTCTCTGGATCTGTGCCCAATTGGATTCAGCAGAGTAATGCTTACAGCGATCTTTCGTACAACAACTTTAATTTGGAAATGCGAGGGGGATATAGTTGTCAACAAGAGAAAGTAAACTTATTCCAAAGCTCTTCTTCAGGGAACAACTCAAATGGAGATATTCCGTGCTTGAAAAGATTTCCATGTCAACAGACTTGGTATTCTTTCCACATAAACTGTGGTGGAGAAGAAGTAAATGTTACTGAAACTACCCCATATGGAGAAGATACATTTAGATATGGAGAAGATAAAATCACGGCTGATCGTGCAAATGTTTTTTTTAGTTCTAAAGATAACTGGGGGTTTAGCAGCACCGGTCACTTCATGGAGACTGACAATGACAAATATATTGCACCCTCACCTCCATACAAACTGTCTATGAAGAACTCCCAATTATACATGAATGCACGCCTTTCTCCACTCTCTTTAACTTATTTCGGATTCTGTCTAGCAAGGGGAAATTACACTGTGAACCTCCACTTTGCTGAGATTATGTTTACAGATGGCAAAAGCTATAGCAGCCTTGGGAGGCGCATATTTGATGTTTATATCCAGAGAAAACGGATGCTGAAGGATTTCAATATTGAAGATGAAGCAGGTGGGGTTGGCAAGGAAGTCATAAAAAAATATAATGTTACTGTGACAAATGGCACTTTGGAGATCCAATTCTATTGGGCTGGAAAAGGGACAACAGCCATCCCTGGTCGAGGAACCTACGGTCCTCTCATATCAGCTATTTCTGTGGTTTCACATGTCAAACCTCCTCCTCCCCCTTCAGAAGGTGGAAAGAAGATATCTGCAGGCTTCATCGTTGGAATTGTGTTTTCAGTATTATGCTTCATCATTGTGGTTCTTGTTATCCTTCGGATGAAAGGCTGTTTGGGAAGCAAAAACACAAGATACAGAGACTTGAGAGGTTTAGACCTACAAACTGGTTCCTTTACATTAAGGCAAATTAAAGCTGCCACGAACAACTTTAATGCTACAAACAAGATCGGAGAAGGCGGTTTTGGATCTGTTTACAAGGGCCAATTATCAGATGGTACCATTATAGCAGTGAAGCAGCTTTCTTCCAAATCAAAGCAAGGAAATCGTGAATTTTTAAATGAGATAGGCATGATATCCGCTTTGCAGCACCCGAGTCTCGTAAAGCTTTATGGTTGTTGCATTGAAGGAAATCAGTTATTGTTAGTATATGAATACATGGAAAATAACTGCCTTGCTCGTGCTTTGTTTGGTCCCGAAGAATGTCAACTGAAACTCGAATGGCCGACTCGGCACAAGATCTGTGTTGGCATAGCGAGAGGCCTTGCTTATCTCCATGAGGAATCAAGACTGAAGATTATTCATAGAGACATCAAAGCTACTAATGTACTGCTTGATAAGGATCTTAACCCTAAGATATCTGACTTTGGTTTGGCTAAGCTTGACGAAGAGGAGAATACCCACATCAGCACTCGAGTAGCTGGAACCATGGGATATATGGCACCAGAGTACGCATTGCGGGGTTACCTGACCGATAAAGCAGATGTTTACAGCTTTGGAGTAGTAGCCTTGGAAATTATCAGCGGCAAAAGCAACACAAGTTACAGGCCAAAGGAGGGTGTTTATCTTCTGGATTGGGCGTTCGTTTTGCAAGAAAAAGAAAGTTTAATGGAGCTAGTGGACCCAAAATTAGGTTCAGAATTCAACCAGGAAGAGGTGATGGGGATGATTAATGTGGCTTTGCTATGCACTAATGCATCTCCAACACTTAGACCTACTATGTCTATGGTCGTGAGCATGCTCGACGGTCGCATTGGTGTTCAGGACTTAGTTTCGCATCCGAAAATTTCTGATAAAGATTTTAGATTTAAGGCCTGGAAGAACCATTATCATGAGATCCAAAGCCAGAGCATGACTATCTCAACAGATACGCCATTAACTGGGTCTTCCTCATCTGCCAATGATCTCTATCCAGTCAATCTGGATTCCCGATATCGGAATACTGAGTAG 3033 0.4237 MLDRRVFLVLVLAFSCLVTFPFAATLVPDEVEALEQIGRSLGKNWNFNEDPCSNDSSWTTLNLKGGSDNSVTCNCTFANNTCHIVKIVLRMQSLQGMLPPELVRLPYLQEIDLNRNYLNGTIPPQWGSMQLVNISLLGNRLSGPIPKEFGSIITLRNLVLEANQLSGVLPPELGNMVNIERILITSNNFTGELPKTLSKLSKLRDLRISANQFTGKIPNFIQDLTKLRRLDIQASGFEGPIPSGISYLQELTDLRFSDIIGPESRFPLVSGMTNLEQLILRSCNISDTLPEYLGAMTSLETLDLSFNKLTGEMPSNFEGLMSEVKTMYLTGNLLSGSVPNWIQQSNAYSDLSYNNFNLEMRGGYSCQQEKVNLFQSSSSGNNSNGDIPCLKRFPCQQTWYSFHINCGGEEVNVTETTPYGEDTFRYGEDKITADRANVFFSSKDNWGFSSTGHFMETDNDKYIAPSPPYKLSMKNSQLYMNARLSPLSLTYFGFCLARGNYTVNLHFAEIMFTDGKSYSSLGRRIFDVYIQRKRMLKDFNIEDEAGGVGKEVIKKYNVTVTNGTLEIQFYWAGKGTTAIPGRGTYGPLISAISVVSHVKPPPPPSEGGKKISAGFIVGIVFSVLCFIIVVLVILRMKGCLGSKNTRYRDLRGLDLQTGSFTLRQIKAATNNFNATNKIGEGGFGSVYKGQLSDGTIIAVKQLSSKSKQGNREFLNEIGMISALQHPSLVKLYGCCIEGNQLLLVYEYMENNCLARALFGPEECQLKLEWPTRHKICVGIARGLAYLHEESRLKIIHRDIKATNVLLDKDLNPKISDFGLAKLDEEENTHISTRVAGTMGYMAPEYALRGYLTDKADVYSFGVVALEIISGKSNTSYRPKEGVYLLDWAFVLQEKESLMELVDPKLGSEFNQEEVMGMINVALLCTNASPTLRPTMSMVVSMLDGRIGVQDLVSHPKISDKDFRFKAWKNHYHEIQSQSMTISTDTPLTGSSSSANDLYPVNLDSRYRNTE* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00972 1010 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 27 260 - -
Eupl02g00972 1010 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Eupl02g00972 1010 ProSiteProfiles Protein kinase domain profile. 672 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00972 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Eupl02g00972 1010 Pfam Malectin domain 401 592 IPR021720 -
Eupl02g00972 1010 FunFam Putative LRR receptor-like serine/threonine-protein kinase 748 954 - -
Eupl02g00972 1010 SUPERFAMILY L domain-like 44 339 - -
Eupl02g00972 1010 SUPERFAMILY Protein kinase-like (PK-like) 657 979 IPR011009 -
Eupl02g00972 1010 Gene3D Ribonuclease Inhibitor 263 401 IPR032675 -
Eupl02g00972 1010 Gene3D Ribonuclease Inhibitor 27 262 IPR032675 -
Eupl02g00972 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 399 597 - -
Eupl02g00972 1010 MobiDBLite consensus disorder prediction 981 1010 - -
Eupl02g00972 1010 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Eupl02g00972 1010 Gene3D - 402 598 - -
Eupl02g00972 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 978 - -
Eupl02g00972 1010 Gene3D Phosphorylase Kinase; domain 1 640 747 - -
Eupl02g00972 1010 SMART serkin_6 672 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00972 1010 Pfam Leucine Rich Repeat 298 320 IPR001611 GO:0005515
Eupl02g00972 1010 Pfam Protein tyrosine and serine/threonine kinase 674 942 IPR001245 GO:0004672|GO:0006468
Eupl02g00972 1010 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 641 747 - -
Eupl02g00972 1010 Gene3D Transferase(Phosphotransferase) domain 1 748 954 - -
Eupl02g00972 1010 CDD STKc_IRAK 678 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00972 Eupl-Chr2 13661682 13695894 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00972 17 996 Receptor kinase-like Gene Family AT1G53420 52.573 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g00972 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00972 - - ming:122088670 1293.87