Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00970 ATGAGCAGTGCTGCCCACAATTTCGCATTGACTCCCGGAAACTGGCGTCCGGGAGGTAACTCTACCGGCCATGTTCCTGATAATAATGATTGGAACTGGAGGCCATCCATGGTACCCCGACCCTTTCCATACCAACCAGTGGAAGCGAGTCGGGGTGCAGAGGATACTTGGTTTTTATTTGAGGAAAGAGTGAGAACAGGCCCTTACGGTTTAACCCGATTCCCATGGCAGCCTCATTCTCCAATCCGAATTCTTGTCGTGGACAGCGGGACGGCACAAGCAGTGAACCCCAGGCTCAGACAGTTCATACAACAGTCCCCTCCAAGGATCAGAGGGCAGTGGCCTATGCAACGGGCTCCACAGGAAGAGGGATCTGGGTTGACCCCAGAAGAGCAAAGGAAGGCCTTAAATAAGTTGAAGAAACAAATTTACAACCCTCCCCCTAAAACCATGAGAAGGTCTCTATACTACAGAGATAAATCCAGTACTGACTTCAATACAAAGGAAGAAGAAAAAGATGAAAATGCCAAAGGGTGCGCGATTTGCTTAGAAGACTTTGATCCTTATCAAGAGGTGCTAGTCACCCCTTGCAACCACATGTTCCACAATGATTGCATTGTCCCATGGGTGAAGAGCAATGGTCAGTGTCCGGTTTGCAGGTTCGTGCTTGGCCAACGGAGACAGGACAATAACAATGTCAATGTGGCTCTCGATGATCCTTTGGCAGATGATCTCATTTCACTTATAAGGGCCATGGAAGAAGCCTTCCAGTATGTGAACATCCGTCGCTAA 792 0.4874 MSSAAHNFALTPGNWRPGGNSTGHVPDNNDWNWRPSMVPRPFPYQPVEASRGAEDTWFLFEERVRTGPYGLTRFPWQPHSPIRILVVDSGTAQAVNPRLRQFIQQSPPRIRGQWPMQRAPQEEGSGLTPEEQRKALNKLKKQIYNPPPKTMRRSLYYRDKSSTDFNTKEEEKDENAKGCAICLEDFDPYQEVLVTPCNHMFHNDCIVPWVKSNGQCPVCRFVLGQRRQDNNNVNVALDDPLADDLISLIRAMEEAFQYVNIRR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00970 263 FunFam RING/U-box superfamily protein 163 236 - -
Eupl02g00970 263 SUPERFAMILY RING/U-box 170 227 - -
Eupl02g00970 263 CDD RING-H2_PA-TM-RING 179 220 - -
Eupl02g00970 263 PANTHER TARGET OF ERK KINASE MPK-1 130 225 - -
Eupl02g00970 263 SMART ring_2 179 219 IPR001841 -
Eupl02g00970 263 ProSiteProfiles Zinc finger RING-type profile. 179 220 IPR001841 -
Eupl02g00970 263 MobiDBLite consensus disorder prediction 111 130 - -
Eupl02g00970 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 237 IPR013083 -
Eupl02g00970 263 Pfam Ring finger domain 179 220 IPR001841 -
Eupl02g00970 263 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00970 Eupl-Chr2 13631316 13633090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00970 131 263 C3H Transcription Factor Family AT3G58720 46.622 2.18e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00970 - - egu:105047484 250.751