Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00963 ATGGCAGAAATCTCTGGAGCTAATGGAAACCTTGCAAAATCCATGGAGGAAGGAGTTTCTATGAATGGTATTGGTGAGGTCCTTCATAAGGAGGATGAGGATCAGAATTCTCCTGCTTCTGCTTCCATAACCAATAAAGGATCAGGTTTTTGTGTATCTGTGTCTTTCTTGCAGAAGTTGATTGCCGAGGTGTTTGGGACGTATTTCGTTATATTTGCGGGGTGCGCCGCGGTGGTGGTGAATCTTACCAAAGACAAGGTAGTGACATTCCCTGGGATCTCCATAGTCTGGGGACTAGTGGTGATGGTCATGGTGTACTCCGTCGGCCATATATCTGGTGCCCACTTCAATCCGGCCGTAACCATCGCCTTCGCCACTTGTCGGAGATTTCCATGGAAACAGGTGCCGGCTTATATATCAGCTCAGGTACTCGGGGCGACACTCGCAAGCGGAACCCTACGGTTACTATTCGGCGGGAAGCAAGAGCATTTCCCGGGAACGATACCAACTGGTTCTGATATGCAGTCTCTAGTGCTGGAATTCATCATCACCTTCTACCTCATGTTCGTCATCTCCGGTGTCGCCACCGACAACCGAGCGATTGGAGAACTTGCGGGGCTTGCAGTGGGAGCGACGGTGCTACTAAACGTGCTTTTCGCGGGGCCAATTTCGGGGGCATCGATGAACCCGGCTCGTAGTTTGGGACCAGCGATTGTATCGAACCGTTACAAGGGGATATGGGTATACATAGTGGGGCCCATATGTGGGGCTGTATCAGGTGCATGGGCCTACAATGTCATACGTTTCACGAACAAGCCGTTGCGAGAGATCACTAAGAGCGGCTCTTTCCTTAAAAGCTTAGGACGAAACGGTTCCTATTGA 882 0.5057 MAEISGANGNLAKSMEEGVSMNGIGEVLHKEDEDQNSPASASITNKGSGFCVSVSFLQKLIAEVFGTYFVIFAGCAAVVVNLTKDKVVTFPGISIVWGLVVMVMVYSVGHISGAHFNPAVTIAFATCRRFPWKQVPAYISAQVLGATLASGTLRLLFGGKQEHFPGTIPTGSDMQSLVLEFIITFYLMFVISGVATDNRAIGELAGLAVGATVLLNVLFAGPISGASMNPARSLGPAIVSNRYKGIWVYIVGPICGAVSGAWAYNVIRFTNKPLREITKSGSFLKSLGRNGSY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00963 293 PANTHER AQUAPORIN NIP2-1 42 284 IPR034294 -
Eupl02g00963 293 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Eupl02g00963 293 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 PRINTS Major intrinsic protein family signature 58 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 Pfam Major intrinsic protein 53 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 SUPERFAMILY Aquaporin-like 52 278 IPR023271 -
Eupl02g00963 293 Gene3D Glycerol uptake facilitator protein. 23 278 IPR023271 -
Eupl02g00963 293 FunFam Aquaporin NIP1-1 14 277 - -
Eupl02g00963 293 NCBIfam MIP family channel protein 62 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl02g00963 293 CDD MIP 58 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00963 Eupl-Chr2 13358009 13361301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00963 17 290 Major Intrinsic Protein MIP AT5G37820 59.489 3.92e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00963 K09874 - msin:131245445 448.743