Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl02g00957 | ATGGATGGATCTCAGGGCGGTTCGAATGCGCCGCCTCCTTTCCTTACGAAGACGTATGATATGGTGGATGATCCCTCTACGAACTCTATCGTTTCTTGGAGTTCGGCTAATAATAGCTTTATCGTGTGGAGTCCACCGGAATTTGCAAGGGATTTGCTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTTGTTAGGCAGCTCAATACATATGGTTTCAGAAAAATTGATCCCGATCAGTGGGAATTCGCAAATGAGGAATTTATAAGAGGTCAGAGACACCTTCTAAAGAATATCCATAGACGTAAACCAATCCATAGTCATTCCCTACAGAATCATCAAGGACAGGGAGATTGTTCAGGAGCATTAGCTGAATCAGTAAAGCAAGAGCTTGAGGACGAAATCGAGAAGTTGAAACATGATAAGGGCTTGCTTCTTTTGGAGCTACAGAGGCATACACAGGAGCAACAAGGAATGGAATTGCAAATGCAGTCTTTGGAGGAGCGTTTGCATCAAATGGAACAGCGCCAGCGGCAAATGATGACCTTCTTGGCTCGAATCATGCAGAAACCTGGGTTTGTCTCCAATCTCATGCAACAGTCAGAAAATCATAACAAAAAGAGAAGGTTGCCGAAACCGGATTATTTCTATGATGAGGCCGATATGGAGGAGAACCAAGTTGTGAGTTATCAGTCGGTGATTAAAGAGAAGTCAGATGCTATTTCTATGAAGGTATTAAACATGGAGCCCTTTGAGAAGTTGGAATCGTCATTAAATTCTTGGGAGAATTTTCTACATGGGGTTGCCCAAGCTTCTGGTGAAGAAACACATAGTGTTGGAGTACCTTTACAGCCTTCTGCAGTTGTACTTACTGAAATGCATGCATCATATGGAGAGACAGACATAAGTATGCAACCACAGTCGCCTAATTTGAATCCGTCATCGCCTCGTTCAAGCGATGTTCACTCCTCTCCTGAGTTGGCGGAATCTCATGTGGAAGGCCCAGTTATTTCTTCTATTCAACTCAATGTAGACATTCCACCTAAAGCTTCTGGGATTGATGTGAATTCTCAGCCTGCTGCTGCTCCCGAGGTTGATGCCTCGAATGAACATGCAGTGGGAACAATAACCTCTGCTGCACCAACTGGGGTGAATGATGTATTCTGGGAACAATTCCTAACTGAGACTCCTGGTTCATCCGACACACAGGAAGTCCAATCAGAAAGAAGGGATACTGATGACAGAAAGAGTGAAAGAAAGCCCACCGATTCTGGCAAATTTTGGTGGAACATGAAGAATGTAGATAATCTTACAGAACAGATGGGGCAACTTACTCCAGCCGAAAGAACCTAA | 1356 | 0.4403 | MDGSQGGSNAPPPFLTKTYDMVDDPSTNSIVSWSSANNSFIVWSPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPIHSHSLQNHQGQGDCSGALAESVKQELEDEIEKLKHDKGLLLLELQRHTQEQQGMELQMQSLEERLHQMEQRQRQMMTFLARIMQKPGFVSNLMQQSENHNKKRRLPKPDYFYDEADMEENQVVSYQSVIKEKSDAISMKVLNMEPFEKLESSLNSWENFLHGVAQASGEETHSVGVPLQPSAVVLTEMHASYGETDISMQPQSPNLNPSSPRSSDVHSSPELAESHVEGPVISSIQLNVDIPPKASGIDVNSQPAAAPEVDASNEHAVGTITSAAPTGVNDVFWEQFLTETPGSSDTQEVQSERRDTDDRKSERKPTDSGKFWWNMKNVDNLTEQMGQLTPAERT* | 452 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl02g00957 | 451 | SMART | hsfneu3 | 10 | 103 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl02g00957 | 451 | Coils | Coil | 122 | 177 | - | - | |
Eupl02g00957 | 451 | ProSitePatterns | HSF-type DNA-binding domain signature. | 53 | 77 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl02g00957 | 451 | PRINTS | Heat shock factor (HSF) domain signature | 65 | 77 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl02g00957 | 451 | PRINTS | Heat shock factor (HSF) domain signature | 14 | 37 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl02g00957 | 451 | PRINTS | Heat shock factor (HSF) domain signature | 52 | 64 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl02g00957 | 451 | MobiDBLite | consensus disorder prediction | 302 | 332 | - | - | |
Eupl02g00957 | 451 | SUPERFAMILY | "Winged helix" DNA-binding domain | 10 | 103 | IPR036390 | - | |
Eupl02g00957 | 451 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 4 | 250 | IPR027725 | - | |
Eupl02g00957 | 451 | MobiDBLite | consensus disorder prediction | 397 | 451 | - | - | |
Eupl02g00957 | 451 | Gene3D | - | 7 | 104 | IPR036388 | - | |
Eupl02g00957 | 451 | MobiDBLite | consensus disorder prediction | 405 | 426 | - | - | |
Eupl02g00957 | 451 | FunFam | Heat shock transcription factor 1 | 7 | 104 | - | - | |
Eupl02g00957 | 451 | Pfam | HSF-type DNA-binding | 14 | 103 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Eupl02g00957 | 451 | MobiDBLite | consensus disorder prediction | 302 | 326 | - | - | |
Eupl02g00957 | 451 | MobiDBLite | consensus disorder prediction | 430 | 451 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl02g00957 | Eupl-Chr2 | 13241133 | 13243841 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl02g00957 | 1 | 451 | HSF | AT4G18880 | 41.703 | 2.25e-103 | 311 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Eupl02g00957 | HSF_DNA-bind | 1.5e-32 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl02g00957 | K09419 | - | msin:131240946 | 646.736 |