Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00957 ATGGATGGATCTCAGGGCGGTTCGAATGCGCCGCCTCCTTTCCTTACGAAGACGTATGATATGGTGGATGATCCCTCTACGAACTCTATCGTTTCTTGGAGTTCGGCTAATAATAGCTTTATCGTGTGGAGTCCACCGGAATTTGCAAGGGATTTGCTGCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTTGTTAGGCAGCTCAATACATATGGTTTCAGAAAAATTGATCCCGATCAGTGGGAATTCGCAAATGAGGAATTTATAAGAGGTCAGAGACACCTTCTAAAGAATATCCATAGACGTAAACCAATCCATAGTCATTCCCTACAGAATCATCAAGGACAGGGAGATTGTTCAGGAGCATTAGCTGAATCAGTAAAGCAAGAGCTTGAGGACGAAATCGAGAAGTTGAAACATGATAAGGGCTTGCTTCTTTTGGAGCTACAGAGGCATACACAGGAGCAACAAGGAATGGAATTGCAAATGCAGTCTTTGGAGGAGCGTTTGCATCAAATGGAACAGCGCCAGCGGCAAATGATGACCTTCTTGGCTCGAATCATGCAGAAACCTGGGTTTGTCTCCAATCTCATGCAACAGTCAGAAAATCATAACAAAAAGAGAAGGTTGCCGAAACCGGATTATTTCTATGATGAGGCCGATATGGAGGAGAACCAAGTTGTGAGTTATCAGTCGGTGATTAAAGAGAAGTCAGATGCTATTTCTATGAAGGTATTAAACATGGAGCCCTTTGAGAAGTTGGAATCGTCATTAAATTCTTGGGAGAATTTTCTACATGGGGTTGCCCAAGCTTCTGGTGAAGAAACACATAGTGTTGGAGTACCTTTACAGCCTTCTGCAGTTGTACTTACTGAAATGCATGCATCATATGGAGAGACAGACATAAGTATGCAACCACAGTCGCCTAATTTGAATCCGTCATCGCCTCGTTCAAGCGATGTTCACTCCTCTCCTGAGTTGGCGGAATCTCATGTGGAAGGCCCAGTTATTTCTTCTATTCAACTCAATGTAGACATTCCACCTAAAGCTTCTGGGATTGATGTGAATTCTCAGCCTGCTGCTGCTCCCGAGGTTGATGCCTCGAATGAACATGCAGTGGGAACAATAACCTCTGCTGCACCAACTGGGGTGAATGATGTATTCTGGGAACAATTCCTAACTGAGACTCCTGGTTCATCCGACACACAGGAAGTCCAATCAGAAAGAAGGGATACTGATGACAGAAAGAGTGAAAGAAAGCCCACCGATTCTGGCAAATTTTGGTGGAACATGAAGAATGTAGATAATCTTACAGAACAGATGGGGCAACTTACTCCAGCCGAAAGAACCTAA 1356 0.4403 MDGSQGGSNAPPPFLTKTYDMVDDPSTNSIVSWSSANNSFIVWSPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPIHSHSLQNHQGQGDCSGALAESVKQELEDEIEKLKHDKGLLLLELQRHTQEQQGMELQMQSLEERLHQMEQRQRQMMTFLARIMQKPGFVSNLMQQSENHNKKRRLPKPDYFYDEADMEENQVVSYQSVIKEKSDAISMKVLNMEPFEKLESSLNSWENFLHGVAQASGEETHSVGVPLQPSAVVLTEMHASYGETDISMQPQSPNLNPSSPRSSDVHSSPELAESHVEGPVISSIQLNVDIPPKASGIDVNSQPAAAPEVDASNEHAVGTITSAAPTGVNDVFWEQFLTETPGSSDTQEVQSERRDTDDRKSERKPTDSGKFWWNMKNVDNLTEQMGQLTPAERT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00957 451 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl02g00957 451 Coils Coil 122 177 - -
Eupl02g00957 451 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl02g00957 451 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl02g00957 451 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl02g00957 451 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl02g00957 451 MobiDBLite consensus disorder prediction 302 332 - -
Eupl02g00957 451 SUPERFAMILY "Winged helix" DNA-binding domain 10 103 IPR036390 -
Eupl02g00957 451 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 250 IPR027725 -
Eupl02g00957 451 MobiDBLite consensus disorder prediction 397 451 - -
Eupl02g00957 451 Gene3D - 7 104 IPR036388 -
Eupl02g00957 451 MobiDBLite consensus disorder prediction 405 426 - -
Eupl02g00957 451 FunFam Heat shock transcription factor 1 7 104 - -
Eupl02g00957 451 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl02g00957 451 MobiDBLite consensus disorder prediction 302 326 - -
Eupl02g00957 451 MobiDBLite consensus disorder prediction 430 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00957 Eupl-Chr2 13241133 13243841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00957 1 451 HSF AT4G18880 41.703 2.25e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl02g00957 HSF_DNA-bind 1.5e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00957 K09419 - msin:131240946 646.736