Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl02g00937 | ATGAGCAGTGCTGCCCACAATTTCGCATTGACTCCCGGAAACTGGCGTCCGGGAGGTAACTCTACCGGCCGTGTTCCTGATAATAATGATTGGAACTGGAGGCCATCCATGGTACCCCGACCCTTTCCATACCAACCAGTGGAAGCGAGTCGGGGTGCAGAGGATACTTGGTTTTTATTTGAGGAAAGAGTGAGAACAGGCCCTTACGGTTTAACCCGATTCCCATGGCAACCTCATTCTCCAATCCGAATTCTTGTCGTGGACAGCGCGACGGCACAAGCAGTGAACCCCAGGCTCAGACAGTTCATACAACAGTCCCCTCCAAGGATCAGAGGGCAGTGGCCTATGCAACGGGCTCCACAGGAAGAGGGATCTGGGTTGACCCCAGAAGAGCAAAGGAAGGCCTTAAATAAGTTGAAGAAACAAATTTACAGCCCTCCCCCTAAAACCATGAGAAGGTCTCTATACTACAGAGATAAATCCAGTACTGACTTCAATACAAAGGAAGAAGAAAAGGATGAAACTGGCAAAGGGTGCGCGATTTGCTTAGAAGACTTTGATCCTTACCAAGAGGTGTTAGTCACCCCTTGCAACCACATGTTCCACAATGATTGCATTGTCCCATGGGTGAAGAGCAATGGTCAGTGTCCGGTTTGCAGGTTCGTGCTCGGCCAACGGAGACAGGACAATAACAATGTCAATGTGGCTCTCGATGATCCTGTGGCAGATGATCTCATTTCACTTATAAGGGCCATGGAAGAAGCCTTTCAGTGGGTGAACATCCGTCGCTAA | 792 | 0.4949 | MSSAAHNFALTPGNWRPGGNSTGRVPDNNDWNWRPSMVPRPFPYQPVEASRGAEDTWFLFEERVRTGPYGLTRFPWQPHSPIRILVVDSATAQAVNPRLRQFIQQSPPRIRGQWPMQRAPQEEGSGLTPEEQRKALNKLKKQIYSPPPKTMRRSLYYRDKSSTDFNTKEEEKDETGKGCAICLEDFDPYQEVLVTPCNHMFHNDCIVPWVKSNGQCPVCRFVLGQRRQDNNNVNVALDDPVADDLISLIRAMEEAFQWVNIRR* | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl02g00937 | 263 | CDD | RING-H2_PA-TM-RING | 179 | 220 | - | - | |
Eupl02g00937 | 263 | SMART | ring_2 | 179 | 219 | IPR001841 | - | |
Eupl02g00937 | 263 | FunFam | RING/U-box superfamily protein | 163 | 236 | - | - | |
Eupl02g00937 | 263 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 162 | 237 | IPR013083 | - | |
Eupl02g00937 | 263 | ProSiteProfiles | Zinc finger RING-type profile. | 179 | 220 | IPR001841 | - | |
Eupl02g00937 | 263 | MobiDBLite | consensus disorder prediction | 111 | 130 | - | - | |
Eupl02g00937 | 263 | SUPERFAMILY | RING/U-box | 169 | 227 | - | - | |
Eupl02g00937 | 263 | PANTHER | TARGET OF ERK KINASE MPK-1 | 130 | 225 | - | - | |
Eupl02g00937 | 263 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Eupl02g00937 | 263 | Pfam | Ring finger domain | 179 | 220 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl02g00937 | Eupl-Chr2 | 12723290 | 12724668 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl02g00937 | 131 | 263 | C3H Transcription Factor Family | AT3G58720 | 45.946 | 3.87e-35 | 125 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl02g00937 | - | - | mus:103992765 | 251.136 |