Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00933 TGGAATCTGTATTGGGTTCTTCTTCACCTTCTTAATCTTCTAATCAATGCTTCTTACTCAATTAATGCCCAACCTTTCGATTATCCGATTGCCAACCTCTCCAATTCATGGACAAACAACCCATCCATTAAACATTCTGTTAGTTTCATGGATGGATCTATGGTGAGGTCTCTCCTTCTCAGAGGAAGCTTTGGCCCACGATATGCCTGCGGCTTTTATTGTGACGGAAACTGCAGTTCTTTCCTATTTGCTGTCTTTATTGTTCAAACCAACAGTGGGTCTGGCATCACTTCTCCTTCTATAGGATTCCCACAAGTTGTCTGGTCTGCGAACCGAAACAATCCAGTTAGAGAGAATGCAACGTTGCAACTCACCCAAGAAGGAGATTTGATATTGCGAGAAGTCGATGGTACTTTAGTTTGGTCTACAAACACAACTGGTAAATCTGTTCTAGGCCTAAACATGACTGAGACGGGAAACCTCTTGCTCTTCGACAGAAACAACGGTACTGTTTGGCAGTCTTTTGATCACCCGACAGACTCTTTAGTTCCCGGGCAGAAGTTGGCAGATGGCCAGAGGCTCACAGCCAGCGCGTCGCCATTGAATTGGTCTGAAGGAGGTTTGTTTTCTCTTTCTGTTACAACTGAAGGTCTGTTTGCTTTTTTTGAGTCTGATCCTACACGATCTTATTATCAATCCATGATTTCTGGCACTAAAGAAAGCACAGAACCAAGCTATGTGAGATTTCTGAATGGAAGTCTCGCTCTGTTCATATTGTCTGCTGAGCCAAACCAGCCAAATTCTGTGATTCCAGTTCCTCTGGCTTCGTCTGCTCAGTACATGAAGTTGGAGTCAGATGGGCATTTGAAAGTTTATGAGTGGGATGCAGGGTGGAAGGAGGTGGCTGATCTCCTGACAGGGTATTTGGGTGAGTGTAACTACCCTATGGTCTGTGGGAATTATGGCATTTGCTCAAATGGGCAGTGCAGCTGTCCTGGAGCGACCAGTAGCGAAACAAGCTACTTTAGGCAATTAAATGACAGGAAACCTGAACTTGGCTGTTCTGTAATTACTCCTTTGTCCTGTGAAGCGCCACAGTATCACAGCCTTCTAGATCTCAAGGACATTACTTACTTCCATTTTCCAGCCAATGTTACAGATACCGACATGGAGAGTTGCAAGCAGGCCTGTTTGAAGAATTGTTCTTGCAAAGCGGCTCTGTTTCAGTATGGTGGGAATGCTTCGAATGGGTATTGCTTCTTACCATCCCAGCTTTTTTCGCTGATGAACAATGAAAAGGAGAAGACACATTATAATTCGTCTGCGTTCATCAAGGTGCAAATCTCCCCAATTGAAGTGGGTCCCTCATCAGAGGTTTCTAGATCGAAAACATCCCGAACCGCAATAATATTGATATCCAGTCTGGGCTCAATCTTTGGTGTATTTCTCCTAATTGGCCTCTTGGTTGTTCTTTTTAGGAAGAAAAAAAATGTGGAGGAAGATGAGGAGGATTATTTAGATCAAGTACCAGGAATGCCCAAACGATTCTCTTATGAAGACTTGGAAATCGCAACAGAGAATTTCTGTCGAAAGCTTGGAGAAGGAGGATTTGGGTCAGTTTTTGAAGGAACACTGATCAGTGGCACCAAAGTTGCAGTGAAACGCCTGGATGGCATAGGCCAGGTGAAGAAATCATTCTTAGCTGAGGTTGAGACAATTGGCAGCATTCACCATGTCAACCTTGTAAGACTTGTTGGATTTTGTGCCGAGAAATCGCACAGGCTTTTAGTTTATGAGTATATGAGCAATGGATCATTGGAGAAATGGATCTACAACAGAAGCCAAGAGCTTTCTCTTGGTTGGCAAGCCAGACGGAAGATCATCCTCGACATAGCCAAAGGACTAGCCTATCTCCATGAAGATTGCAGGCAGAGAATAATCCACTTAGATATTAAACCCCAAAATATCCTTCTAGACGACAACTTCAATGCTAAGGTTTCAGATTTTGGGTTGTCTAAGCTGATAGACAGGGATCAGAGCCAAGTTATGACCACAATGAGAGGAACTCCTGGATATTTGGCTCCAGAATGGTTGACCTCAGTGATCACGGAAAAAGTAGACGTCTATAGCTTTGGGGTTGTGGTCATGGAGATTCTGTGTGGACGTAAGAATTTGGACCGCTCTCTGAACGAAGAAAGTATGCATCTACTTAGTTTATTAAAAAGAAAGGCAGAGGAGGAACAATTGTCTGATATGATCGACAAACACAGCGATGATATGCAGTTACATATGGAAGAAGCCATGGAAATGATGGGTGTTGCTGCTTGGTGTTTACAAAGTGACTTTGCTAGAAGGCCTTCCATGTCAGTGGTGGTGAAGGTCTTAGAGGGTGTGATGGATGTTGTGCCTAGCCTAGATTATAGCTTCTCAACTACACTACCACAACCATCCACAACCGCGTTAGTTCATGAAGAGTCAGGTCAAGGTGCTTCAGCTCCATTACTGGCATCAGTCCTATCAGGCCCGAGATGA 2532 0.4392 WNLYWVLLHLLNLLINASYSINAQPFDYPIANLSNSWTNNPSIKHSVSFMDGSMVRSLLLRGSFGPRYACGFYCDGNCSSFLFAVFIVQTNSGSGITSPSIGFPQVVWSANRNNPVRENATLQLTQEGDLILREVDGTLVWSTNTTGKSVLGLNMTETGNLLLFDRNNGTVWQSFDHPTDSLVPGQKLADGQRLTASASPLNWSEGGLFSLSVTTEGLFAFFESDPTRSYYQSMISGTKESTEPSYVRFLNGSLALFILSAEPNQPNSVIPVPLASSAQYMKLESDGHLKVYEWDAGWKEVADLLTGYLGECNYPMVCGNYGICSNGQCSCPGATSSETSYFRQLNDRKPELGCSVITPLSCEAPQYHSLLDLKDITYFHFPANVTDTDMESCKQACLKNCSCKAALFQYGGNASNGYCFLPSQLFSLMNNEKEKTHYNSSAFIKVQISPIEVGPSSEVSRSKTSRTAIILISSLGSIFGVFLLIGLLVVLFRKKKNVEEDEEDYLDQVPGMPKRFSYEDLEIATENFCRKLGEGGFGSVFEGTLISGTKVAVKRLDGIGQVKKSFLAEVETIGSIHHVNLVRLVGFCAEKSHRLLVYEYMSNGSLEKWIYNRSQELSLGWQARRKIILDIAKGLAYLHEDCRQRIIHLDIKPQNILLDDNFNAKVSDFGLSKLIDRDQSQVMTTMRGTPGYLAPEWLTSVITEKVDVYSFGVVVMEILCGRKNLDRSLNEESMHLLSLLKRKAEEEQLSDMIDKHSDDMQLHMEEAMEMMGVAAWCLQSDFARRPSMSVVVKVLEGVMDVVPSLDYSFSTTLPQPSTTALVHEESGQGASAPLLASVLSGPR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00933 843 FunFam S-receptor-like kinase 5 601 804 - -
Eupl02g00933 843 ProSiteProfiles Bulb-type lectin domain profile. 34 176 IPR001480 -
Eupl02g00933 843 FunFam serine/threonine-protein kinase PBS1-like 494 600 - -
Eupl02g00933 843 Gene3D - 85 205 - -
Eupl02g00933 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Eupl02g00933 843 SUPERFAMILY Protein kinase-like (PK-like) 509 796 IPR011009 -
Eupl02g00933 843 PIRSF SRK 30 837 IPR024171 GO:0004674
Eupl02g00933 843 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524
Eupl02g00933 843 ProSiteProfiles PAN/Apple domain profile. 362 442 IPR003609 -
Eupl02g00933 843 Pfam PAN-like domain 383 408 IPR003609 -
Eupl02g00933 843 Pfam Protein kinase domain 530 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00933 843 FunFam Os04g0303100 protein 97 230 - -
Eupl02g00933 843 CDD STKc_IRAK 532 797 - -
Eupl02g00933 843 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 55 802 - -
Eupl02g00933 843 SMART blect_4 56 178 IPR001480 -
Eupl02g00933 843 CDD B_lectin 104 178 IPR001480 -
Eupl02g00933 843 ProSiteProfiles Protein kinase domain profile. 526 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00933 843 CDD PAN_AP_plant 358 446 - -
Eupl02g00933 843 Gene3D Phosphorylase Kinase; domain 1 496 600 - -
Eupl02g00933 843 SMART serkin_6 526 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00933 843 Pfam D-mannose binding lectin 106 190 IPR001480 -
Eupl02g00933 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 68 176 - -
Eupl02g00933 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 103 232 IPR036426 -
Eupl02g00933 843 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00933 Eupl-Chr2 12672681 12675484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00933 502 801 Receptor kinase-like Gene Family AT5G20050 44.304 5.45e-80 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl02g00933 Pkinase 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00933 - - nnu:104586549 1161.75