Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00912 ATGGATCATGAGATACAAAATCAGCAAGGATCGAGTGAGATTGCGTCGGAGACTGTAATTGTGGTCTCATCTGCAGAAGCTGAAAGTGTTGTCAGTGTTGGTGGAGAAGATCAGGTTTCGGAAGCTAAGAAGAATGTATTGGAGACGAGTGGGAAGGTCTCCGTGGAGGAGCGAAAAGCAAATGTTGTTGCACCAGAGAAACATACTTGTGTCATTGATATTAAATGCAGCGGTGAAACGCTGAAAAGCGAAAATTGGGACGGCGAGAAGATTTGCAGAATCTGTCATTTGAGTGCTGATCGCCCGTCCGAAACTCCGGATCTGATTCAGCTTGGTTGCAAATGTAAGGACGATCTTGGTATAGCACATCGTCACTGTGCTGAGGCCTGGTTTAAGCTAAAAGGCAACAGATGTTGCGAAATTTGTGGTGAGGCTGCAAAAAATATTACCGGTGTGGGGGACAACAGGTTCATGGAGGAGTGGAATGAGAGGAGATTAGGAGGTAATAGCACCAACTCCTCGGACAGGAGGAGAGGATTCTGGCAGGGACAGCCATTTTGTAACTTCCTTATGGCGTGCCTGGTGATAGCCTTTGTATTGCCATGGTTTTTCCGTGTAAATATGTTTTGA 630 0.4603 MDHEIQNQQGSSEIASETVIVVSSAEAESVVSVGGEDQVSEAKKNVLETSGKVSVEERKANVVAPEKHTCVIDIKCSGETLKSENWDGEKICRICHLSADRPSETPDLIQLGCKCKDDLGIAHRHCAEAWFKLKGNRCCEICGEAAKNITGVGDNRFMEEWNERRLGGNSTNSSDRRRGFWQGQPFCNFLMACLVIAFVLPWFFRVNMF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00912 209 PANTHER ZINC FINGER, RING-CH-TYPE 24 209 - -
Eupl02g00912 209 ProSiteProfiles Zinc finger RING-CH-type profile. 84 149 IPR011016 GO:0008270
Eupl02g00912 209 SUPERFAMILY RING/U-box 88 144 - -
Eupl02g00912 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 152 IPR013083 -
Eupl02g00912 209 SMART ringv_2 91 143 IPR011016 GO:0008270
Eupl02g00912 209 Pfam RING-variant domain 92 142 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00912 Eupl-Chr2 12202273 12208316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00912 89 208 C3H Transcription Factor Family AT5G05830 48.413 5.99e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00912 - - nnu:104589735 282.722