Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00905 ATGGAACGAGTGATGGTTTTGTTGCTGTTGTTACCTGTGGTTCAAGCTTCCAACAACCTTCTCTCTCCCAAGGGCGTTAACTATGAAGTGGCAGCTTTGATGTCAGTGAAGAGTAAGTTGAGAGATGATGGTCTTCGTCTTCTGGATGGATGGGATATTAATTCGGTGGATCCTTGCACTTGGAACTTAGTTGGGTGCTCTCCTGAGGGTTTTGTGATTTCTCTAGAAATGGTCAGTAAGGGCTTGTTCGGTACGCTTTCTCCTAGCGTTGGGAATTTGAGTCATCTTCAGACAATGTTATTGCAGAATAATCGAATATCTGGTCCTATTCCAGTCGAGATTGGGAGGCTGTCAGAGCTTCGGACTCTTGATCTGTCAGGTAACCAGTTTGTCGGTGAAATTCCAAGCTCTTTGGGATTTCTGACTCATCTAAGTTACTTGCGGCTTAGCAAGAACAGTTTGTCTGGTCAGATTCCCAGAGGTGTTGCTAATCTCACAGGCCTTTCATTCTTGGATCTGTCATTCAATAATCTTAGTGGTCCCACTCCAAGAATACTTGCAAAAGAGTACAGTGTGGCAGGGAATAGGTTTCTTTGCAATTCATCACTCCAACAAGTTTGCATGGATGTTCCTAAGCCTGTAAAAGAGATGAATTCATCACAAAAAGCCAGTGGTCATCATCAATGGGTGGTTGCTGTTGCCGTAGGCGTCAGTTGCACCTTTGTGGTTTCTGTGATGCTGATTGTTTGTTGGATGCACTGGTGCAGGTGGCGTGTCCCTTTTGCATCACATGTGCAACAAGATTATGAATTTGATATGGGTCATCTGAAGAGGTTTTCATTTCGTGAACTCCAAATTGCCACTGAAAATTTTAGTCCCAAGAACATTGTAGGCCATGGTGGATTTGGGGTGGTCTATAGAGGATGTCTTCGGAATAGGACAATAGTGGCAGTCAAAAGATTGAAGGATCCCAATTTTACTGGAGAACTGCAGTTTCAAACAGAAGTAGAGATGATTGGCTTGGCTCTGCACCGGAACCTCTTACGTTTATATGGATTTTGTATGTCATCGAATGAGAGGCTGCTTGTTTATCCATACATGTCAAATGGAAGTGTCGCTGATCGCTTGAGAGATCCTCGACGTGAGAAGCCATCCTTAGATTGGAACAGACGAATCCGAATCGCCCTTGGGGCTGCTCGTGGACTGTTGTACTTACATGAACAGTGTAACCCAAAAATCATTCACAGGGATGTCAAAGCTGCAAATATTTTGCTTGACGAAAGTTTCGAAGCTGTGGTTGGGGATTTCGGTCTGGCAAAGCTTTTAGATCAGAGGGATTCACATGTCACAACTGCAGTGCGGGGTACCGTGGGACACATTGCCCCCGAGTATCTTTCTACAGGGCAGTCTTCTGAGAAAACTGATGTATTTGGATTTGGCATACTACTTTTGGAACTCATAACGGGGCAGAAAGCATTAGATGCTGGAAATGGTCTGGTTCCAAAAGGCATGATTCTTGATTGGGTTAGGACCTTGCACGAGGAGAAGAGGCTGGAAGTGCTGGTGGATAGGGATTTAAATGGTTGCTTTGATGCAGTCGAACTGGAAAAGGCAGTGGAGGTGGCTATTCTGTGCACTCAATCACATCCCAACCAGCGGCCAAAGATGTCGGAAGTTGTGAAGGTCCTGGAAGGTATAGCTGGACCGGAAGGACATGCGGAAGAATTGCAAGGCGGAATCCTTTCCAGGGGGAGGTCTTGCAGTTTCTCCAGAAATAACAGTGATGTCCATGAGGAATCTTCATTCATCATTGAAGCGATGGAGCTTTCAGGGCCCAGGTGA 1842 0.4539 MERVMVLLLLLPVVQASNNLLSPKGVNYEVAALMSVKSKLRDDGLRLLDGWDINSVDPCTWNLVGCSPEGFVISLEMVSKGLFGTLSPSVGNLSHLQTMLLQNNRISGPIPVEIGRLSELRTLDLSGNQFVGEIPSSLGFLTHLSYLRLSKNSLSGQIPRGVANLTGLSFLDLSFNNLSGPTPRILAKEYSVAGNRFLCNSSLQQVCMDVPKPVKEMNSSQKASGHHQWVVAVAVGVSCTFVVSVMLIVCWMHWCRWRVPFASHVQQDYEFDMGHLKRFSFRELQIATENFSPKNIVGHGGFGVVYRGCLRNRTIVAVKRLKDPNFTGELQFQTEVEMIGLALHRNLLRLYGFCMSSNERLLVYPYMSNGSVADRLRDPRREKPSLDWNRRIRIALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGLVPKGMILDWVRTLHEEKRLEVLVDRDLNGCFDAVELEKAVEVAILCTQSHPNQRPKMSEVVKVLEGIAGPEGHAEELQGGILSRGRSCSFSRNNSDVHEESSFIIEAMELSGPR* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00905 613 FunFam Somatic embryogenesis receptor kinase 1 261 366 - -
Eupl02g00905 613 Gene3D Ribonuclease Inhibitor 26 209 IPR032675 -
Eupl02g00905 613 Gene3D Phosphorylase Kinase; domain 1 261 366 - -
Eupl02g00905 613 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 562 - -
Eupl02g00905 613 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Eupl02g00905 613 Gene3D Transferase(Phosphotransferase) domain 1 367 569 - -
Eupl02g00905 613 ProSiteProfiles Protein kinase domain profile. 291 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00905 613 FunFam Somatic embryogenesis receptor-like kinase 1 367 578 - -
Eupl02g00905 613 Pfam Protein kinase domain 294 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00905 613 FunFam Putative LRR receptor-like serine/threonine-protein kinase 26 209 - -
Eupl02g00905 613 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Eupl02g00905 613 SUPERFAMILY Protein kinase-like (PK-like) 273 564 IPR011009 -
Eupl02g00905 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Eupl02g00905 613 SUPERFAMILY L domain-like 29 192 - -
Eupl02g00905 613 SMART serkin_6 291 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00905 Eupl-Chr2 12073852 12082970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00905 34 613 Receptor kinase-like Gene Family AT5G45780 69.931 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl02g00905 Pkinase 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00905 - - nnu:104609754 991.104