Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00903 ATGGAAGAAGGAGATGAGAGGAGGAAGGAGGGCATTGCTCTGGTCATCATCGTTGTTCTTGCAGCTTTAGCTGTAGCTTCGTTGCTTGTTGCTTTCAGCTACTACTGCTACATCAGGAACAAAGTCTCCCAGCGCGTCAAGAACTCCAAAAGGAGTGATTATGGTGAGAAAGGTGGGTTTGCAAACATCCAAGTTGCCGCAGAGAAGGGCCTTCACGTTTTTACTTTCAAGCAGCTTCACTCGGCGACTTCTGGCTTCGGCAAGTCTAATGTGATCGGACACGGTGGGTTTGGTTCTGTTTACAGGGGAGTTCTTTCGGATGGGAGGAAGATTGCTGTAAAGTTGATGGATCGGGCGGGAAAACAGGGAGAAGAGGAGTTCAAAATGGAGGTGGAGTTGCTGAGTCGTCTTCGGTCTCCGTATTTACTGGCTTTGATTGGGTATTGTTCGGACAATGACCATAAATTGTTGGTTTATGAGTTTATGGCGAATGGCGGTCTGCAGGAACATCTGTATCCCAACGGTGGTTCCAATGGTGTTGCTTCGAAGTTGGACTGGGAGACCCGATTGAGAATAGCTCTGGAAGCTGCAAAAGGTCTGGAATACCTTCATGAACATGTCAGCCCCCCTGTGATTCACAGAGATTTTAAGAGCAGTAACATCCTCCTGGATAAGAACTTCCATGCCAAAGTTTCTGATTTTGGCCTGGCCAAGCTTGGATCGGACAGAGCTGGAGGCCATGTTTCCACCCGAGTGTTAGGCACTCAGGGATACGTCGCCCCTGAGTATGCATTAACTGGTCATCTCACTACCAAATCAGATGTTTATAGTTATGGGGTTGTGCTCTTGGAATTGCTCACAGGCAGGGTTCCAGTTGACATGAAGAGAGCTGCTGGGGAAGGTGTCCTTGTATCATGGGCTTTGCCTCAACTTACCGACAGAGAGAAGGTTGTCCATATCATGGATCCAGCATTAGAAGGTCAGTACTCAATGAAGGAAGTCGTTCAGGTGGCTGCCATTGCTGCTATGTGCGTGCAATCCGAAGGTGATTACAGGCCCCTGATGGCAGATGTTGTGCAGTCACTGGTCCCTCTCGTGAAGCATCACAGACCAACTTCAAAGGTAGGCAGCTGTTCTAGCTTCCATGCTACTAAATCTCCAACTGCACAAGATTGTGGTAAAGCCATTTCCTAA 1194 0.4832 MEEGDERRKEGIALVIIVVLAALAVASLLVAFSYYCYIRNKVSQRVKNSKRSDYGEKGGFANIQVAAEKGLHVFTFKQLHSATSGFGKSNVIGHGGFGSVYRGVLSDGRKIAVKLMDRAGKQGEEEFKMEVELLSRLRSPYLLALIGYCSDNDHKLLVYEFMANGGLQEHLYPNGGSNGVASKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRAAGEGVLVSWALPQLTDREKVVHIMDPALEGQYSMKEVVQVAAIAAMCVQSEGDYRPLMADVVQSLVPLVKHHRPTSKVGSCSSFHATKSPTAQDCGKAIS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00903 397 CDD STKc_IRAK 92 365 - -
Eupl02g00903 397 ProSiteProfiles Protein kinase domain profile. 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00903 397 ProSitePatterns Protein kinases ATP-binding region signature. 92 121 IPR017441 GO:0005524
Eupl02g00903 397 SUPERFAMILY Protein kinase-like (PK-like) 69 362 IPR011009 -
Eupl02g00903 397 MobiDBLite consensus disorder prediction 371 397 - -
Eupl02g00903 397 Gene3D Transferase(Phosphotransferase) domain 1 162 381 - -
Eupl02g00903 397 Pfam Protein tyrosine and serine/threonine kinase 90 362 IPR001245 GO:0004672|GO:0006468
Eupl02g00903 397 Gene3D Phosphorylase Kinase; domain 1 45 161 - -
Eupl02g00903 397 PANTHER OS07G0668900 PROTEIN 57 370 - -
Eupl02g00903 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Eupl02g00903 397 FunFam Serine/threonine-protein kinase PBS1 54 161 - -
Eupl02g00903 397 FunFam Receptor-like serine/threonine-protein kinase ALE2 162 380 - -
Eupl02g00903 397 MobiDBLite consensus disorder prediction 373 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00903 Eupl-Chr2 12041071 12051229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00903 3 395 Receptor kinase-like Gene Family AT3G58690 79.040 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Eupl02g00903 Pkinase 8.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00903 - - vvi:100252390 681.404