Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00893 ATGGAGTGTCGATGGAACCGTTTCGGATTTTGGTTCCATAGAGTGTCTTGTTTCGTGGTCTTGGCGCTTCTCTTCCAAATCCATGAATGTTGGTCGCTTAACCATGAAGGATTGGCGTTATTGGGATTCCGGGCAAGTGTGGACAATGATCCTTATGGTGTCTTCATGAATTGGAACCCTAATCATAGCAACCCCTGTATGTGGTTTGGTGTTCACTGTGTGGATGGCAACGTGCGAATGCTGGATCTTAAAGGACTTTCTTTGGAAGGAATACTGGCGCCTGAGCTTGGGAAACTTAGTCACTTAAAATCTCTTAACCTCTACAAGAACCACTTCTCTGGTGTTATCCCTAAAGAGATTGGCGGGCTTACCATGCTGGAGCTATTGGATTTGAGGGCTAATAACTTAAGTGGAACAATTCCAGCAGAAATAGGCCAGATGCTGTCACTGAAGCGCATGCTGCTTTGTGACAATAAATTTCGGGGCAGCATTCCTTCCGAGGTTGGGAATCTCACTATGCTCTCTGAGATACAATTTGACCAAAGCCTTACATTTGCTGTGACATCTGGAATTGGCTGTATGCATAGAAAACTGGGACATTGCATCTGGCAGAACAGTTTGAAACAGCTGAAGAAGGCAGACTCTTTCGTGATCCCAATAAAGGAGAAACTTTTACGTCATCTCAATGTATTTCCACTGTTCAACTTCAGAAAGGGCACTTCACATGTCTGTGGAGAGAGATTCTGTGACAATCTACGAAGTTCAGTTGAACCGTACATGGTACAAAATGTACAGCACATAGTAAATTTTGTACGCCGCAGACTGCTTCAAGAATCCAGTAACCTCCCTGCTGCACCAGTGAGGGGTGGTGCTCCCCCTGAACAAATGACAACTAACCCATCTACCCGAAGCAGTGGGGCTTTCCCTGCAATGCCAAATGGCAATAAGAAACAATCTCCCCCATCTTCATCACTGTCTTCTTGGGCAGATCCTCCCCCGCACCAATCTCCTAGTACACCAAATCCTAACTCCCAGTCTTCCCAAACTCCTGCTGCGTCCCTCGGAAAACCAACTGAACAGCAACCACTAGCTGGTGGTTCATCTGGAAATAGATGGAAGTATGCTATCGTGGTTCCAGGTGTGGGCTTTGTTCTCACTATTGCTGCAGTCATGCTCTGTATGTGTCGGAGCCAGGGAGTGTCGGCCATTGGTCCTTGGAAGACTGGACTAAGTGGCCAATTGCAGAAGGCATTTGTCACAGGGGTGCCCAAGCTGAACCGTCCAGAGCTAGAAACTGCCTGTGAGGATTTCAGCAATATTATTGACACCCTTGCAGACTGCACAGTGTTCAAGGGAACACTGTCAAGTGGAGTCGAGATTGCGGTTGCATCAACTGCAATTGTGTCATCCAAAGACTGGTCGAAGAGCTCGGAAAAGGCCTACAGGAAAAAGATTGATATACTGTCACGGGTAAACCACAAGAACTTTGTCAATCTTCTGGGCTACTGTGAGGAGGATGAACCTTTCATCAGGATGATGGTGTTTGAATATGCTCCCAATGGAACCCTCTTTGAGCATCTACATGTTAAAGAAGTTGAATATCTTGACTGGAATGCTAGGATGAGGATTATTATGGGAACAGCTTATTGCCTTCAATACATGCACCATGAACTGAACCCACCTGTTGCACATCCCAATTTGCAGTCAAATGCTGTCTATTTGACAGATGATTACGCCGCTAAGATTGCAGATATCAGTTTCTGGGCAGATCTTGCAGTTAAATCAAAGAGTTTTAGCGAAGATGAATCACAGCATTCAGAACTGCCACCGCTTGTGGATCCTGAAACGAATGTCTACTGTTTTGGAATATTGTTACTAGAAATCATTTCTGGGAAGCTCCCTAATTCTGAAGAACACGGGTCACTCGTGGACTGGGTTTCCGAATACTTGAATGACAAGCGAAGCATCAGCTACATGATCGATCCAACTCTCAAGTCATTCAAGAACAATGAGCTTGATATCGTCTGCGAGGTCATCCAGGAGTGCATCCATCAGGATCCAATGCAGAGACCAACGATGAGGGAGATCACTGGCAAACTGAGGGAAGTGATTGCTATCTCGCCTGACGCAGCGACCCCAAGACTTTCTCCACTTTGGTGGGCAGAACTCGAGATCCTCTCGGTTGAGGCTACTTAA 2196 0.4608 MECRWNRFGFWFHRVSCFVVLALLFQIHECWSLNHEGLALLGFRASVDNDPYGVFMNWNPNHSNPCMWFGVHCVDGNVRMLDLKGLSLEGILAPELGKLSHLKSLNLYKNHFSGVIPKEIGGLTMLELLDLRANNLSGTIPAEIGQMLSLKRMLLCDNKFRGSIPSEVGNLTMLSEIQFDQSLTFAVTSGIGCMHRKLGHCIWQNSLKQLKKADSFVIPIKEKLLRHLNVFPLFNFRKGTSHVCGERFCDNLRSSVEPYMVQNVQHIVNFVRRRLLQESSNLPAAPVRGGAPPEQMTTNPSTRSSGAFPAMPNGNKKQSPPSSSLSSWADPPPHQSPSTPNPNSQSSQTPAASLGKPTEQQPLAGGSSGNRWKYAIVVPGVGFVLTIAAVMLCMCRSQGVSAIGPWKTGLSGQLQKAFVTGVPKLNRPELETACEDFSNIIDTLADCTVFKGTLSSGVEIAVASTAIVSSKDWSKSSEKAYRKKIDILSRVNHKNFVNLLGYCEEDEPFIRMMVFEYAPNGTLFEHLHVKEVEYLDWNARMRIIMGTAYCLQYMHHELNPPVAHPNLQSNAVYLTDDYAAKIADISFWADLAVKSKSFSEDESQHSELPPLVDPETNVYCFGILLLEIISGKLPNSEEHGSLVDWVSEYLNDKRSISYMIDPTLKSFKNNELDIVCEVIQECIHQDPMQRPTMREITGKLREVIAISPDAATPRLSPLWWAELEILSVEAT* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00893 731 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Eupl02g00893 731 MobiDBLite consensus disorder prediction 340 367 - -
Eupl02g00893 731 MobiDBLite consensus disorder prediction 282 367 - -
Eupl02g00893 731 ProSiteProfiles Protein kinase domain profile. 435 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00893 731 SUPERFAMILY Protein kinase-like (PK-like) 424 698 IPR011009 -
Eupl02g00893 731 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 33 184 - -
Eupl02g00893 731 Pfam Protein tyrosine and serine/threonine kinase 448 700 IPR001245 GO:0004672|GO:0006468
Eupl02g00893 731 Gene3D Ribonuclease Inhibitor 32 216 IPR032675 -
Eupl02g00893 731 PANTHER PROTEIN MALE DISCOVERER 2 14 729 - -
Eupl02g00893 731 FunFam Inactive receptor-like serine/threonine-protein kinase At2g40270 518 714 - -
Eupl02g00893 731 SUPERFAMILY L domain-like 32 181 - -
Eupl02g00893 731 Gene3D Phosphorylase Kinase; domain 1 410 517 - -
Eupl02g00893 731 MobiDBLite consensus disorder prediction 294 332 - -
Eupl02g00893 731 Gene3D Transferase(Phosphotransferase) domain 1 518 710 - -
Eupl02g00893 731 FunFam Inactive receptor-like serine/threonine-protein kinase 409 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00893 Eupl-Chr2 11869499 11876516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00893 90 717 Receptor kinase-like Gene Family AT5G49660 25.154 8.20e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Eupl02g00893 PK_Tyr_Ser-Thr 2.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00893 - - ming:122093696 1010.75