Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00879 ATGGACGGAACGGAAAATCCAACGGCAACTGGACGTCCGTCACACACTCCGTTACCCATTCGTGAGGACTGCTGGAGCGAGGACGCTACCTACACCCTTATCGAGGCCTGGGGCGACCGTCACCTTGAGCTCAACCGCGGCAACCTCCGTCAGAAACACTGGCAAGAAGTTGCAGACGCCGTTAACGCTCGTCACGGCGCCGTTAAGAAGGCTCGTCGCACCGATGTTCAGTGCAAGAACCGGATCGACACTTTAAAGAAGAAATACAAGTTAGAGAAAGCTAGGGTTTCGGCTTCGGACGGAACCCTAACCAGTAAATGGCCCTTTTATTCCCGTCTCGATGCCCTAATTGGTTCTTCTGTGCCGTCGAAGAAACCCTCGCCACCGCTCGCCCTTCCTTTGCCCTATCGGAAACCGCCGCCTTCGCTTCCACACGCTTCGGCGGTGCCGGTTGGCGTACGATCGGCGAAGGAGAAGCGCCCTGCATCGTCCATTGGCGTTGATGATTCATTCTTTCGGAGAAATTATTCAATGGTTGCTGCTGCAGCGGCAGCGGATTCTGGATCGTCGAGGTCGAGCACTGAGAGCCGGCGTCGAGATGCGGAGGTGGATGGGTTTCGGGAGCTGGCGCAGGCAATCGTGAGATTTGGAGAGATTTATGAGAGGGTGGAGGGGGAGAAGCAGCTGCAGATGATTGAATTGGAGAAGCAGAGGATGGATTTTATGAAGACTCTGGAGTTTCAGAGGATGCAGCTTTTTATGGATACGCAGGTCCAGCTTGAGAAGATCAAGCGTGCGAGGAGAGCCGCCGCAGCTGACAGCTATTTATAG 831 0.5487 MDGTENPTATGRPSHTPLPIREDCWSEDATYTLIEAWGDRHLELNRGNLRQKHWQEVADAVNARHGAVKKARRTDVQCKNRIDTLKKKYKLEKARVSASDGTLTSKWPFYSRLDALIGSSVPSKKPSPPLALPLPYRKPPPSLPHASAVPVGVRSAKEKRPASSIGVDDSFFRRNYSMVAAAAAADSGSSRSSTESRRRDAEVDGFRELAQAIVRFGEIYERVEGEKQLQMIELEKQRMDFMKTLEFQRMQLFMDTQVQLEKIKRARRAAAADSYL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00879 276 Gene3D - 25 91 - -
Eupl02g00879 276 MobiDBLite consensus disorder prediction 1 21 - -
Eupl02g00879 276 FunFam trihelix transcription factor ASIL2 25 91 - -
Eupl02g00879 276 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 267 IPR044823 -
Eupl02g00879 276 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00879 Eupl-Chr2 11596475 11608966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00879 181 265 Trihelix Transcription Factor Family AT3G14180 42.708 1.43e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl02g00879 Myb_DNA-bind_4 9.7e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00879 - - nnu:104611587 401.364