Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00852 ATGGAATTACCGATAACGCTTCCGGTTTCCGGTGGCCGGAAAACCCCATATAGACTAGAAACCAAGAAACTCTCTTACCAATTATGTCGGCGAGCCGACGATTTCAATTGGGTTTGTTGTGGGGAGGCTACTACTAGTACTACTAGTAGGTACATTTTGAAGAACGTAGATTGTGAGGCTAAACCAGGGAAGATCACTGCGATTGCTGGTCCTAGTGGAGCTGGAAAGACTACATTATTGGAAATTCTAGCTGGAGTGATACCACCAAGTCGAGTCTCCGGTTGGGTTCTAGTTAATGATCGACCGATGGATGTAAAGCATTTTAGGCGAGTCTCGGGGTATGTCACTCAAGATGATGCGCTCTTCCCGTTGCTTACAGTCGAAGAAACGCTCACGTATAGTGCTCGATTAAGGCTATGTGGTGGACGCAATGAGGTAGTGGCTAGAGTGAGACAGTTATTGAAGGAGCTTGGATTGGAACATATTGCAGGTTCAAGAATTGGTGGGGATTCCAGTCGTGGGATCTCGGGCGGCGAGAAGCGTAGGGTCTCTATCGGAGTTGATTTAGTCCATGATCCAGCTATTCTTTTGATCGACGAGCCAACATCGGGATTGGATTCGGCGTCGGCTCTTCATGTCGTCTCATTGCTTAAATCAATGGCAATGAATCAAGGTAAGACAATTGTCCTGACTATCCATCAACCAGGTTTTCGGATTCTCGAGCTTATCGATCAAGTTGTGTTGCTATCAAATGGAATTGTTCTTCATCATGGATCACTGCATCCTCTTGAGGTGCAGCTTAAGGCTTCTGGTCAGCGCATACCTCGGCATGTCAATGTGCTTGAGTTTGCAATTGATGTCATGGAAAGCCTGGATATAAGAACCCCAATGACCCTCAATGATCAATTCTTTCTTGAGGACAATGGTAATGAAGATTACAAAGAAGAAGAGTATTTTATGAGAATTCCAAACTCTAATTATGTTGGAGAAAAGAGACTCCTATACCCGAATTCTCGACTTGAGGAGGTCTTAATACTAAGCCAAAGATTCTGCAACAACATATTTCGAACCAAGCAACTCTTTGTCGCAAGAATGATCCAATCCATAGTGGCGGGGTTCGCACTAGGGACCATATTCATGAACGTTAGCGGCCAGGCCAAATTACAAACCCGTATCGGGTTCTTCGCCTTTACCCTCACCTTCCTGCTATCCACTACAACGGAAGGCCTACCAATTTTCTTGCAAGAGAGGAGAATTTTAATGAGAGAGACTTCCAGAGGAGCTTATAGAGTCTCGTCTTACGTTATAGCTAACACCCTCGTCTTCCTTCCTTTCCTTTTAACAGTTGCTCTTCTCTACACCACACCTGTATACTGGTTTGTTGGTTTAAGGAGGGAAATCGATGGGTTTCTCTACTTCTCTCTAGTGGTTTGGATGGTTGTCTTGATGTCGAATTCTTTCGTTGCTTGTTTCAGCGCTCTTGTGCCGAATTTCATCATGGGGACTTCATTGATTGCTGGGTTTATGGGGTCATTTTTTCTCTTCTCCGGCTACTTTATATCGAAGAAGAACATACCCAAGTATTGGATCTTCATGCACTATTTGAGTTTGTTTAAGTACCCATTTGAGTGTTTTATGATAAATGAGTATGGAGGGGATAAGGGGAGGAGTATATGTGTGGAAAGTGTGAAAGGAGTATGCCTTCTATATGGGGATGGGTTCTTAAGACAGCAAGAATTGAAAGACTCTCAGAAATGGAGCAATTTAGGTGTCATGTTGGTTTTCATCTTTGGGTACAGAGTACTGTGTTTTTTCATTCTATGGTTCAGATGTTACAGGACAAGAAATTAG 1851 0.4354 MELPITLPVSGGRKTPYRLETKKLSYQLCRRADDFNWVCCGEATTSTTSRYILKNVDCEAKPGKITAIAGPSGAGKTTLLEILAGVIPPSRVSGWVLVNDRPMDVKHFRRVSGYVTQDDALFPLLTVEETLTYSARLRLCGGRNEVVARVRQLLKELGLEHIAGSRIGGDSSRGISGGEKRRVSIGVDLVHDPAILLIDEPTSGLDSASALHVVSLLKSMAMNQGKTIVLTIHQPGFRILELIDQVVLLSNGIVLHHGSLHPLEVQLKASGQRIPRHVNVLEFAIDVMESLDIRTPMTLNDQFFLEDNGNEDYKEEEYFMRIPNSNYVGEKRLLYPNSRLEEVLILSQRFCNNIFRTKQLFVARMIQSIVAGFALGTIFMNVSGQAKLQTRIGFFAFTLTFLLSTTTEGLPIFLQERRILMRETSRGAYRVSSYVIANTLVFLPFLLTVALLYTTPVYWFVGLRREIDGFLYFSLVVWMVVLMSNSFVACFSALVPNFIMGTSLIAGFMGSFFLFSGYFISKKNIPKYWIFMHYLSLFKYPFECFMINEYGGDKGRSICVESVKGVCLLYGDGFLRQQELKDSQKWSNLGVMLVFIFGYRVLCFFILWFRCYRTRN* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00852 616 FunFam ABC transporter G family member 10 37 282 - -
Eupl02g00852 616 CDD ABCG_EPDR 45 258 - -
Eupl02g00852 616 SMART AAA_5 62 252 IPR003593 GO:0016887
Eupl02g00852 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 16 601 - -
Eupl02g00852 616 Pfam ABC-2 type transporter 342 550 IPR013525 GO:0016020|GO:0140359
Eupl02g00852 616 Pfam ABC transporter 53 203 IPR003439 GO:0005524
Eupl02g00852 616 Gene3D - 42 281 IPR027417 -
Eupl02g00852 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 262 IPR027417 -
Eupl02g00852 616 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Eupl02g00852 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 276 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00852 Eupl-Chr2 11123805 11125848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00852 52 263 Calmodulin-binding Proteins AT2G36910 29.279 1.42e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00852 K05681 - nnu:104612144 920.998