Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00796 ATGGAGGGAGAGAACCAGATTGAGGTATACGCAGAATGCCAACGAAACCATTCAGCCCCTCTCGGCATCTACTCGACAGATGGCTGTGGTGAGTACATGGCTGACTATACTACGCCGGGCAAGCTGCTTTGCGCAGCCTGCCGTTGCCACCGCAATTTCCACCGGAAAGTCATGGTCATGTGCAGCGAAGGTGGCAAAGCTGCCATTGGTAGTGGGAAAGGAGGAAGCAGCAGCAGCCGAGTAAAAGATGTGGAGGTGGTAGAGATGATAGAGTGTGACGCAGAACAGTCAAATGCGGTGGAGGAGCAGGAACAGGATCAAAGTGGGAAGAAGAAGGGCAGGACCAGGTTCACGGCCGAACAGAAGGAGAAAATGACGGGCTTCGCAGAGAGGCTGGGATGGCGGATTCCAAGAAAAGATCATGCAGATGAAATCCAACGTTTCTGCAGAGAGATTGGGGTGACTAGGCAGAAGTTCAAGGTTTGGATGCAGAACCAAAAGAGAACTGTTCTTCCTACTCCTTGA 525 0.52 MEGENQIEVYAECQRNHSAPLGIYSTDGCGEYMADYTTPGKLLCAACRCHRNFHRKVMVMCSEGGKAAIGSGKGGSSSSRVKDVEVVEMIECDAEQSNAVEEQEQDQSGKKKGRTRFTAEQKEKMTGFAERLGWRIPRKDHADEIQRFCREIGVTRQKFKVWMQNQKRTVLPTP* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00796 174 SUPERFAMILY Homeodomain-like 99 168 IPR009057 -
Eupl02g00796 174 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 10 57 IPR006456 -
Eupl02g00796 174 Pfam ZF-HD protein dimerisation region 9 58 IPR006456 -
Eupl02g00796 174 Gene3D - 94 171 - -
Eupl02g00796 174 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 9 169 - -
Eupl02g00796 174 MobiDBLite consensus disorder prediction 95 117 - -
Eupl02g00796 174 NCBIfam homeobox domain, ZF-HD class 110 167 IPR006455 -
Eupl02g00796 174 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 10 56 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00796 Eupl-Chr2 10162084 10162723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00796 10 170 ZF-HD Transcription Factor Family AT2G18350 39.560 2.52e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Eupl02g00796 ZF-HD_dimer 2.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00796 - - nnu:104587730 193.741