Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00789 ATGGGAAGAATTAGAGGTCGCTCTGGTTCAGTGCTAGATCGATTCGTTCTCCTTCGTCGTCTCGAATCCTGCAAGAAGCACAACACATACAGGGTCGACGAGATCGTCGATTATCTCCGCTCAAACTTCCCCGATTACAAACGAGTCAAGCTTCAACCTTTCACCAAACATGTCCAACAAACCCTAGAATTCCATCAGAGAAAAAACCTATCTGCTTCAACTTCTAATGTTGACGACAACGACGACGAAGACACCAATCACTTCCCGAGCCCAGCTCGTAAGAAGCTAAAGAAGATCGATCGAAGAGAAGAGAAATTGCTCCGTAAAGAAGAGGAGTACATTCGTCGGAAACAGAAACATCAAGGTCCTACATCGGCATCATCATTGTCTTCATCGGATGATGATGAAGAAGACGGAGCGGTTTCGACGTCTGAAGATGCGATTTTTGAAACGCAAGTGGAACCGGAATTTGATTTGACAAAGTCGATGCTTCGGTCGAGTTACTGCACATCGAAGAATGTCCATTCGAAGGTTGAAGAAGAGAAGAATTTGGAGGTGGAGGTGGTTAATAAGGGGAAGAATATTGCTCTGGTGGAAGGAGACAGGAGTGAACCAATGATGAAGGAGAAATTGACGGATTTGAAGGGTTCTGGAGATGGTTGTGAGGTAAAGGGGAAGGATGGACCGAGGTTTAAGGATTTGGGAGGGATGAAAGGGGTGTTGGATGAGTTGATGATGGAGGTGATTGTTCCGCTTTACCATCCGCAGTTGCCACGGTGGTTGGGAGTGAGGCCGATGGCGGGGATTCTGTTGCATGGGCCACCTGGGTGTGGGAAGACGAAACTTGCTCACGCTATTGCTAATGAAACTGGAGTCCCATTTTATAAGATTTCGGCTACTGAAGTGGTCTCTGGTGTCTCAGGTGCATCTGAAGAGAATATTCGTGACCTTTTCTCAAAAGCATACAGGACTGCTCCATCAATTATATTCATTGATGAGATAGACGCCATTGCTTCGAAAAGAGAAACTCTACAAAGAGAGATGGAGCGGCGGATTGTGACACAACTGATGACATGCATGGATGAATCACATCAAATTATAGGTCCAGCTGATGTAGATTTGGATCAGAAAAATCTGATCAGAGGCCTGGTTATGTTCTTGTAA 1164 0.4553 MGRIRGRSGSVLDRFVLLRRLESCKKHNTYRVDEIVDYLRSNFPDYKRVKLQPFTKHVQQTLEFHQRKNLSASTSNVDDNDDEDTNHFPSPARKKLKKIDRREEKLLRKEEEYIRRKQKHQGPTSASSLSSSDDDEEDGAVSTSEDAIFETQVEPEFDLTKSMLRSSYCTSKNVHSKVEEEKNLEVEVVNKGKNIALVEGDRSEPMMKEKLTDLKGSGDGCEVKGKDGPRFKDLGGMKGVLDELMMEVIVPLYHPQLPRWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIIFIDEIDAIASKRETLQREMERRIVTQLMTCMDESHQIIGPADVDLDQKNLIRGLVMFL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00789 387 Pfam ATPase family associated with various cellular activities (AAA) 269 364 IPR003959 GO:0005524|GO:0016887
Eupl02g00789 387 MobiDBLite consensus disorder prediction 65 101 - -
Eupl02g00789 387 MobiDBLite consensus disorder prediction 113 153 - -
Eupl02g00789 387 MobiDBLite consensus disorder prediction 80 101 - -
Eupl02g00789 387 Coils Coil 92 112 - -
Eupl02g00789 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 365 IPR027417 -
Eupl02g00789 387 Pfam Nucleolin binding domain 7 63 IPR031996 -
Eupl02g00789 387 PANTHER AAA-FAMILY ATPASE 85 363 - -
Eupl02g00789 387 SMART AAA_5 265 383 IPR003593 GO:0016887
Eupl02g00789 387 Gene3D - 219 377 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00789 Eupl-Chr2 9933177 9935418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00789 231 368 Calmodulin-binding Proteins AT3G56690 41.429 4.03e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00789 K14571 - nnu:104593610 518.079